RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SEC11AP67812 179 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 TMEM238C9JI98 176 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 OGG1O15527 345 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 LURAP1LQ8IV03 231 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 LILRA3Q8N6C8 439 aaPredicted RBP15.26■□□□□ 0.03
SMAD4-201ENST00000342988 TRAV8-1A0A0A6YYK1 113 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 M0R381 172 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 SOX8P57073 446 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 TRAV9-1A0A075B6T8 112 aa15.26■□□□□ 0.03
SMAD4-201ENST00000342988 FOXI3A8MTJ6 420 aaPredicted RBP15.25■□□□□ 0.03
SMAD4-201ENST00000342988 TGFAP01135 160 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 UCNP55089 124 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 SSBP2P81877 361 aaPredicted RBP15.25■□□□□ 0.03
SMAD4-201ENST00000342988 RPRMQ9NS64 109 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 EDIL3O43854 480 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 AGFG2O95081 481 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 SPINK14Q6IE38 97 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 POC1AQ8NBT0 407 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 VENTXO95231 258 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 CCL19Q99731 98 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 TMEM30AQ9NV96 361 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 LINC00614P0C842 121 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 CD69Q07108 199 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 GREB1LQ9C091 1923 aaPredicted RBP15.25■□□□□ 0.03
SMAD4-201ENST00000342988 SCN7AQ01118 1682 aa15.25■□□□□ 0.03
SMAD4-201ENST00000342988 SPINT1O43278 529 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 ROS1P08922 2347 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 ARID2Q68CP9 1835 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 CCL21O00585 134 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 OR11H4Q8NGC9 324 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 PATE1Q8WXA2 126 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 GPR183P32249 361 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 TINAGQ9UJW2 476 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 TAF15Q92804 592 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMAD4-201ENST00000342988 DPM2O94777 84 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 SFXN3Q9BWM7 321 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 PEMTQ9UBM1 199 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 SOCS1O15524 211 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 NKX2-2O95096 273 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 FXYD3Q14802 87 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 CENPWQ5EE01 88 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 TMEM174Q8WUU8 243 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 PLCH1Q4KWH8 1693 aa15.24■□□□□ 0.03
SMAD4-201ENST00000342988 ZNF71Q9NQZ8 489 aaPredicted RBP15.23■□□□□ 0.03
SMAD4-201ENST00000342988 PDLIM7Q9NR12 457 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 LOC390937A0A1W2PQ73 354 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 CD5LO43866 347 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 HCP5Q6MZN7 132 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 ALKAL1Q6UXT8 129 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 PTPRFP10586 1907 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 A0A0U1RQV5 110 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 ZNF205O95201 554 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 C14orf144Q96I85 54 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 KCNE1BA0A087WTH5 132 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 INAFM2P0DMQ5 153 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 LRRC61Q9BV99 259 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 ZNF488Q96MN9 340 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 APOHP02749 345 aaPredicted RBP15.23■□□□□ 0.03
SMAD4-201ENST00000342988 RND2P52198 227 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 TMEM258P61165 79 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 GATD1Q8NB37 220 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 LINC01587Q99440 93 aa15.23■□□□□ 0.03
SMAD4-201ENST00000342988 LEPP41159 167 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 GUSBP11Q6P575 273 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 UBE2DNLQ8IWF7 75 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 ITLN2Q8WWU7 325 aaPredicted RBP15.22■□□□□ 0.03
SMAD4-201ENST00000342988 ISG15P05161 165 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 IL6RP08887 468 aaPredicted RBP15.22■□□□□ 0.03
SMAD4-201ENST00000342988 BRCA1P38398 1863 aaKnown RBP15.22■□□□□ 0.03
SMAD4-201ENST00000342988 SHISA8B8ZZ34 492 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 SRSF1Q07955 248 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMAD4-201ENST00000342988 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.22■□□□□ 0.03
SMAD4-201ENST00000342988 CXCL3P19876 107 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 SIRT4Q9Y6E7 314 aaPredicted RBP15.22■□□□□ 0.03
SMAD4-201ENST00000342988 KLK8O60259 260 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 RCC1P18754 421 aaPredicted RBP15.22■□□□□ 0.03
SMAD4-201ENST00000342988 TMEM222Q9H0R3 208 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 KCPQ6ZWJ8 1503 aa15.22■□□□□ 0.03
SMAD4-201ENST00000342988 MYOD1P15172 320 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 MYOGP15173 224 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 ORMDL2Q53FV1 153 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 ERG28Q9UKR5 140 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 TBR1Q16650 682 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 DCAF10Q5QP82 559 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 LINC00305Q7Z4B0 112 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 CXorf51AA0A1B0GTR3 108 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 H3BMM0 161 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 HOGA1Q86XE5 327 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 COQ2Q96H96 371 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 RLFQ13129 1914 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 NPIPB11E5RHQ5 1161 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 RIPPLY2Q5TAB7 128 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 DEFB123Q8N688 67 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 OR9G4Q8NGQ1 327 aa15.21■□□□□ 0.03
SMAD4-201ENST00000342988 C17orf99Q6UX52 265 aa15.21■□□□□ 0.02
SMAD4-201ENST00000342988 SMIM14Q96QK8 99 aa15.21■□□□□ 0.02
SMAD4-201ENST00000342988 TMEFF2Q9UIK5 374 aaPredicted RBP15.21■□□□□ 0.02
SMAD4-201ENST00000342988 FBXW9Q5XUX1 488 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms