RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GCHFRP30047 84 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 TIGITQ495A1 244 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 PARM1Q6UWI2 310 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 C7orf71A4D174 169 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 CELA2BP08218 269 aaPredicted RBP15.48■□□□□ 0.07
SMPD1-201ENST00000342245 PPIAL4GP0DN37 164 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 SSTR5P35346 364 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 PDLIM3Q53GG5 364 aaPredicted RBP15.48■□□□□ 0.07
SMPD1-201ENST00000342245 OR1N2Q8NGR9 330 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 TMEM38BQ9NVV0 291 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 HELTA6NFD8 242 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 G3V3Y1 287 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 SCGB2A2Q13296 93 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 FAM69BQ5VUD6 431 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 GUCD1Q96NT3 240 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 CHRDL1Q9BU40 450 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 GP6Q9HCN6 339 aa15.48■□□□□ 0.07
SMPD1-201ENST00000342245 J3QW42 95 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 ZG16O60844 167 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 COL9A1P20849 921 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 TMEM196Q5HYL7 178 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 GCSAMLQ5JQS6 135 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.47■□□□□ 0.07
SMPD1-201ENST00000342245 C7orf61Q8IZ16 206 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 SCRT2Q9NQ03 307 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 TNFRSF19Q9NS68 423 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 ARHGAP21Q5T5U3 1957 aa15.47■□□□□ 0.07
SMPD1-201ENST00000342245 H3BMH7 237 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 RAB29O14966 203 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 SPINK4O60575 86 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 CENPWQ5EE01 88 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 CFAP161Q6P656 301 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 ABI3Q9P2A4 366 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 KMT2EQ8IZD2 1858 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 HSPB6O14558 160 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 OR13H1Q8NG92 308 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 METTL7AQ9H8H3 244 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 RARRES3Q9UL19 164 aa15.46■□□□□ 0.07
SMPD1-201ENST00000342245 RANBP2P49792 3224 aaKnown RBP15.46■□□□□ 0.07
SMPD1-201ENST00000342245 IGHV5-51A0A0C4DH38 117 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 LINC01565O15544 149 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 GPR183P32249 361 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 C20orf204Q6ZNR8 217 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 SPACA3Q8IXA5 215 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 OR5A1Q8NGJ0 315 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 IL1F10Q8WWZ1 152 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 ATP6V0BQ99437 205 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 OR1A1Q9P1Q5 309 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 LILRA5A6NI73 299 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 K7EP34 96 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 OR2J3O76001 311 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 RNASEKQ6P5S7 137 aaKnown RBP15.45■□□□□ 0.06
SMPD1-201ENST00000342245 C16orf47Q6ZP98 133 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-201ENST00000342245 DRAM1Q8N682 238 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 WFDC12Q8WWY7 111 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 KCNIP1Q9NZI2 227 aa15.45■□□□□ 0.06
SMPD1-201ENST00000342245 TRANK1O15050 2925 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 H3BRM9 83 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 GNG7O60262 68 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 HAND1O96004 215 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 SRFP11831 508 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 GATA2P23769 480 aaPredicted RBP15.44■□□□□ 0.06
SMPD1-201ENST00000342245 PCBD1P61457 104 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 Q5PR19 223 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 ST6GALNAC6Q969X2 333 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 C9orf118A6NHY6 69 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 SYS1-DBNDD2H3BUS1 97 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 PRSS12P56730 875 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 SLAQ13239 276 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 TMEM108Q6UXF1 575 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 UBALD2Q8IYN6 164 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 SLC22A18ASQ8N1D0 253 aa15.44■□□□□ 0.06
SMPD1-201ENST00000342245 A6NDN8 102 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 RRHO14718 337 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 CLDN14O95500 239 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 OTX2P32243 289 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 FASLGP48023 281 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 TFF2Q03403 129 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 CATR1Q13166 79 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 SPATA46Q5T0L3 261 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 IBA57Q5T440 356 aaKnown RBP15.43■□□□□ 0.06
SMPD1-201ENST00000342245 S100A7AQ86SG5 101 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 WDR31Q8NA23 367 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 IL36RNQ9UBH0 155 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 FAM231BA6NCW3 169 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 WISP2O76076 250 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 BHLHA15Q7RTS1 189 aaPredicted RBP15.43■□□□□ 0.06
SMPD1-201ENST00000342245 CHCHD1Q96BP2 118 aaKnown RBP15.43■□□□□ 0.06
SMPD1-201ENST00000342245 WNT16Q9UBV4 365 aa15.43■□□□□ 0.06
SMPD1-201ENST00000342245 A0A1W2PQF6 199 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 C15orf62A8K5M9 175 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 ZNF32P17041 273 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 G6PCP35575 357 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 CEACAM21Q3KPI0 293 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 PQLC2Q6ZP29 291 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 SPATA12Q7Z6I5 190 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 RNASE7Q9H1E1 156 aaKnown RBP15.42■□□□□ 0.06
SMPD1-201ENST00000342245 TECRQ9NZ01 308 aaKnown RBP15.42■□□□□ 0.06
SMPD1-201ENST00000342245 HBZP02008 142 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 SP9P0CG40 484 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms