RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 TIMM9Q9Y5J7 89 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A10PA6NDY2 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A18PA6NE21 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A16PA6NEW6 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A20PA6NIJ5 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A8PA6NJQ4 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A7PA6NKC0 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A22PA8MWA6 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A12PA8MX19 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A5PA8MXJ8 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A23PA8MXZ1 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 MT-CO3P00414 261 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A15PP0C7V4 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A13PP0C7W8 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A14PP0C7W9 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 FAM90A24PP0C7X0 464 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 HES1Q14469 280 aa10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 POLR3KQ9Y2Y1 108 aaPredicted RBP10.62□□□□□ -0.71
SSX2IP-201ENST00000342203 RBP4P02753 201 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 HIST1H1EP10412 219 aaKnown RBP10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 ACSF3Q4G176 576 aaPredicted RBP10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 PRSS1P07477 247 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 CSRP1P21291 193 aaKnown RBP10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 GATA2P23769 480 aaPredicted RBP10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 CSN1S1P47710 185 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 IGHV5-10-1A0A0J9YXX1 117 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 CEACAM18A8MTB9 384 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 ZNF645Q8N7E2 425 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 MPDU1O75352 247 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 REG1BP48304 166 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 DHRS13Q6UX07 377 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 TXNDC17Q9BRA2 123 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 TWSG1Q9GZX9 223 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 KLF13Q9Y2Y9 288 aaPredicted RBP10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 LOXL2Q9Y4K0 774 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 USF3Q68DE3 2245 aa10.61□□□□□ -0.71
SSX2IP-201ENST00000342203 RAMP3O60896 148 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 CLDN14O95500 239 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 CA2P00918 260 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 PLP1P60201 277 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 NMSQ5H8A3 153 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 Q6ZRM9 215 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 STPG3Q8N7X2 389 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 TMEM178AQ8NBL3 297 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 WDR74Q6RFH5 385 aaPredicted RBP10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 SLC25A45Q8N413 288 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 PGLYRP4Q96LB8 373 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 WNT9BO14905 357 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 AMY1AP04745 511 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 ZNF83P51522 516 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 ZNF324BQ6AW86 544 aaPredicted RBP10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 KCNS1Q96KK3 526 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 NEU1Q99519 415 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 TRGV5A0A0B4J1U4 118 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 MKRN2OSH3BPM6 223 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 LINC01551Q86U37 167 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 TCF19Q9Y242 345 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 PLXNA3P51805 1871 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 RND2P52198 227 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 LYZP61626 148 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 KRTCAP3Q53RY4 240 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 FGFBP3Q8TAT2 258 aa10.6□□□□□ -0.71
SSX2IP-201ENST00000342203 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 GZMHP20718 246 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 FBLN7Q53RD9 439 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 C19orf35Q6ZS72 473 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 NIT1Q86X76 327 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 CPEB3Q8NE35 698 aaKnown RBP10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 PAXXQ9BUH6 204 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 SSBP4Q9BWG4 385 aaPredicted RBP10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 ASCL3Q9NQ33 180 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 A6NDN8 102 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 LINC00869P0C866 280 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 TMEM54Q969K7 222 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 DCTN5Q9BTE1 182 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 NKX6-3A6NJ46 265 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 Q5PR19 223 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 FER1L6-AS2Q96M78 137 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 NABP2Q9BQ15 211 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 MS4A5Q9H3V2 200 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 CORTO00230 105 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 ZNF207O43670 478 aaKnown RBP10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 RFPL3SP0C7P2 107 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 IL15RAQ13261 267 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 IL11RAQ14626 422 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 C10orf113Q5VZT2 155 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 TMEM45BQ96B21 275 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 TRA2AQ13595 282 aaKnown RBP eCLIP10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 SAPCD1Q5SSQ6 148 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 C1orf53Q5VUE5 145 aa10.59□□□□□ -0.71
SSX2IP-201ENST00000342203 TFF1P04155 84 aa10.58□□□□□ -0.72
SSX2IP-201ENST00000342203 CFPP27918 469 aa10.58□□□□□ -0.72
SSX2IP-201ENST00000342203 KLF3P57682 345 aaPredicted RBP10.58□□□□□ -0.72
SSX2IP-201ENST00000342203 RNPS1Q15287 305 aaKnown RBP10.58□□□□□ -0.72
SSX2IP-201ENST00000342203 GNB4Q9HAV0 340 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms