RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 C3orf36Q3SXR2 165 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 ZNF474Q6S9Z5 364 aaPredicted RBP12.03□□□□□ -0.48
TDP2-201ENST00000341060 TREML4Q6UXN2 200 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 TGIF2LYQ8IUE0 185 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 VKORC1L1Q8N0U8 176 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 HEYLQ9NQ87 328 aaPredicted RBP12.03□□□□□ -0.48
TDP2-201ENST00000341060 TMEM140Q9NV12 185 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 GAB2Q9UQC2 676 aa12.03□□□□□ -0.48
TDP2-201ENST00000341060 IGLV3-9A0A075B6K5 115 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 TRAV38-1A0A0B4J264 116 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 TRGV8A0A0C4DH27 118 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 H7BYZ3 331 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 RRHO14718 337 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 OPRK1P41145 380 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 GALR1P47211 349 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 RAB7AP51149 207 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 C4orf17Q53FE4 359 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 DMRT1Q9Y5R6 373 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 PLCE1Q9P212 2302 aa12.02□□□□□ -0.48
TDP2-201ENST00000341060 YLPM1P49750 1951 aaKnown RBP12.02□□□□□ -0.49
TDP2-201ENST00000341060 DYSFO75923 2080 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 IGHV3-7P01780 117 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 GATA4P43694 442 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 RTP5Q14D33 572 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 GCSAMLQ5JQS6 135 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 ALKBH2Q6NS38 261 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 IGFL3Q6UXB1 125 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 OR4S2Q8NH73 311 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 ITLN1Q8WWA0 313 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 OR5B12Q96R08 314 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 FAM215AQ9Y5M1 114 aa12.02□□□□□ -0.49
TDP2-201ENST00000341060 ICE1Q9Y2F5 2266 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 SLC31A2O15432 143 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 PDE6DO43924 150 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 HRASP01112 189 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 GYPAP02724 150 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 FOXC1Q12948 553 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 C17orf58Q2M2W7 97 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 PDZD11Q5EBL8 140 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 C1orf229Q6ZS94 237 aaPredicted RBP12.01□□□□□ -0.49
TDP2-201ENST00000341060 NECAP1Q8NC96 275 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 FAM222BQ8WU58 562 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 RAB9BQ9NP90 201 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 PITPNC1Q9UKF7 332 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 TRAV3A0A0B4J244 114 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 A0A1W2PPV4 95 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 SPRY3O43610 288 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 NPPCP23582 126 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
TDP2-201ENST00000341060 TMEM170AQ8WVE7 144 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 MGST2Q99735 147 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 GFOD1Q9NXC2 390 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 TCF19Q9Y242 345 aa12.01□□□□□ -0.49
TDP2-201ENST00000341060 SAA2-SAA4A0A096LPE2 208 aa12□□□□□ -0.49
TDP2-201ENST00000341060 C15orf61A6NNL5 157 aa12□□□□□ -0.49
TDP2-201ENST00000341060 SAA2P0DJI9 122 aaPredicted RBP12□□□□□ -0.49
TDP2-201ENST00000341060 SELLP14151 372 aa12□□□□□ -0.49
TDP2-201ENST00000341060 UTF1Q5T230 341 aa12□□□□□ -0.49
TDP2-201ENST00000341060 RPRMLQ8N4K4 120 aa12□□□□□ -0.49
TDP2-201ENST00000341060 ELOVL1Q9BW60 279 aa12□□□□□ -0.49
TDP2-201ENST00000341060 GGTLC1Q9BX51 225 aa12□□□□□ -0.49
TDP2-201ENST00000341060 MS4A5Q9H3V2 200 aa12□□□□□ -0.49
TDP2-201ENST00000341060 KCNIP2Q9NS61 270 aa12□□□□□ -0.49
TDP2-201ENST00000341060 KBTBD11-OT1A0A1B0GTJ5 212 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 PPP5D1E7EU14 171 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 TMPRSS2O15393 492 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 VHLLQ6RSH7 139 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 SDSLQ96GA7 329 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 TRAV20A0A0B4J274 112 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 FABP4P15090 132 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 TIMP3P35625 211 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 FAM3BP58499 235 aaPredicted RBP11.99□□□□□ -0.49
TDP2-201ENST00000341060 FAM201AQ5SY85 155 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 ABHD12Q8N2K0 398 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 LEAP2Q969E1 77 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 RHOVQ96L33 236 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 TXNDC17Q9BRA2 123 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 PATZ1Q9HBE1 687 aaKnown RBP11.99□□□□□ -0.49
TDP2-201ENST00000341060 GCM1Q9NP62 436 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 TMEM14BQ9NUH8 114 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 FOXA2Q9Y261 457 aaPredicted RBP11.99□□□□□ -0.49
TDP2-201ENST00000341060 LSM4Q9Y4Z0 139 aaKnown RBP11.99□□□□□ -0.49
TDP2-201ENST00000341060 PXMP4Q9Y6I8 212 aa11.99□□□□□ -0.49
TDP2-201ENST00000341060 A0A1W2PPQ1 181 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 GGCTO75223 188 aaKnown RBP11.98□□□□□ -0.49
TDP2-201ENST00000341060 SRP14P37108 136 aaKnown RBP11.98□□□□□ -0.49
TDP2-201ENST00000341060 ATP5G3P48201 142 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 UBE2G2P60604 165 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 GNB1P62873 340 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 DNLZQ5SXM8 178 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 STUMQ69YW2 141 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 LINC01551Q86U37 167 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms