RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 OR2A7Q96R45 310 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 KLK9Q9UKQ9 250 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 MRPS7Q9Y2R9 242 aaKnown RBP12.98□□□□□ -0.33
BRCC3-202ENST00000340647 U3KQK5 164 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 RYR2Q92736 4967 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 TNFAIP8O95379 198 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 EIF4EP06730 217 aaKnown RBP12.97□□□□□ -0.33
BRCC3-202ENST00000340647 AREGP15514 252 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 GNRHRP30968 328 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 TAS2R20P59543 309 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 TIMM50Q3ZCQ8 353 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 UBE2NLQ5JXB2 153 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 LYSMD2Q8IV50 215 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 SAMD12Q8N8I0 201 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 SLC25A46Q96AG3 418 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 OR4C12Q96R67 309 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 FUNDC2Q9BWH2 189 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 SLC5A7Q9GZV3 580 aa12.97□□□□□ -0.33
BRCC3-202ENST00000340647 IZUMO1RA6ND01 250 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 SULT1C2O00338 296 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 FRMD6-AS1P0C7T7 363 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 EDN2P20800 178 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 RFX2P48378 723 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 FXYD4P59646 89 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 POU2AF1Q16633 256 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 OR4A47Q6IF82 309 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 DHRS11Q6UWP2 260 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 SSX9Q7RTT3 188 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 CROCCP3Q8IVE0 287 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 S100A16Q96FQ6 103 aaKnown RBP12.96□□□□□ -0.33
BRCC3-202ENST00000340647 SPIN2AQ99865 258 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 SPIN2BQ9BPZ2 258 aa12.96□□□□□ -0.33
BRCC3-202ENST00000340647 DYNC2H1Q8NCM8 4307 aaKnown RBP12.95□□□□□ -0.34
BRCC3-202ENST00000340647 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
BRCC3-202ENST00000340647 FAM223BA6NKX1 122 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 NPIPB5A8MRT5 1133 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 OR2J3O76001 311 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 CRYGCP07315 174 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 RPL27AP46776 148 aaKnown RBP12.95□□□□□ -0.34
BRCC3-202ENST00000340647 FAM223AQ8IWN6 122 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 SPAG16Q8N0X2 631 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 NAA50Q9GZZ1 169 aaKnown RBP12.95□□□□□ -0.34
BRCC3-202ENST00000340647 SLC2A9Q9NRM0 540 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 BET1LQ9NYM9 111 aa12.95□□□□□ -0.34
BRCC3-202ENST00000340647 MPPED1O15442 326 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.34
BRCC3-202ENST00000340647 NDUFB8O95169 186 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 CTRB1P17538 263 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 CBX5P45973 191 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 VBP1P61758 197 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 EXOSC2Q13868 293 aaKnown RBP12.94□□□□□ -0.34
BRCC3-202ENST00000340647 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 NECAP1Q8NC96 275 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 RSRP1Q9BUV0 290 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 ELOVL1Q9BW60 279 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 C19orf73Q9NVV2 129 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 SIGLEC8Q9NYZ4 499 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 ZNF257Q9Y2Q1 563 aa12.94□□□□□ -0.34
BRCC3-202ENST00000340647 CSMD3Q7Z407 3707 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 PPP5D1E7EU14 171 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 CREBL2O60519 120 aaPredicted RBP12.93□□□□□ -0.34
BRCC3-202ENST00000340647 PMP2P02689 132 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 MAS1LP35410 378 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 OR2B8PP59922 312 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 RPL8P62917 257 aaKnown RBP12.93□□□□□ -0.34
BRCC3-202ENST00000340647 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 C15orf32Q32M92 178 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 TMEM69Q5SWH9 247 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 TMEM17Q86X19 198 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 VSTM2AQ8TAG5 236 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 GPX8Q8TED1 209 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 MOB3AQ96BX8 217 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 FYTTD1Q96QD9 318 aaKnown RBP12.93□□□□□ -0.34
BRCC3-202ENST00000340647 FXYD6Q9H0Q3 95 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 EHFQ9NZC4 300 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 S4R3C0 116 aa12.93□□□□□ -0.34
BRCC3-202ENST00000340647 IGLC7A0M8Q6 106 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 UPK2O00526 184 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 ACTL6BO94805 426 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 S1PR2O95136 353 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 HRASP01112 189 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 HLA-AP01891 365 aaKnown RBP12.92□□□□□ -0.34
BRCC3-202ENST00000340647 REG1AP05451 166 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 IGHV4-30-4P0DP06 118 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 HLA-GP17693 338 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 PSMB6P28072 239 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 KIR2DS2P43631 304 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 ZNF585BQ52M93 769 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 ANKRD13BQ86YJ7 626 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 OR51H1Q8NH63 302 aa12.92□□□□□ -0.34
BRCC3-202ENST00000340647 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
BRCC3-202ENST00000340647 IGLV11-55A0A075B6I3 123 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 A8MZ25 164 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 PGLYRP1O75594 196 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-202ENST00000340647 HPRT1P00492 218 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 IGHV3-23P01764 117 aa12.91□□□□□ -0.34
BRCC3-202ENST00000340647 ELK1P19419 428 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms