RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 FTH1P19P0C7X4 201 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 CD46P15529 392 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 GDF1P27539 372 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 RPS16P62249 146 aaKnown RBP12.85□□□□□ -0.35
LIMK2-203ENST00000340552 WIPI1Q5MNZ9 446 aaPredicted RBP12.85□□□□□ -0.35
LIMK2-203ENST00000340552 TSKUQ8WUA8 353 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 SRXN1Q9BYN0 137 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
LIMK2-203ENST00000340552 SPINK4O60575 86 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 ARR3P36575 388 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 GCSAMLQ5JQS6 135 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 ABI3Q9P2A4 366 aa12.85□□□□□ -0.35
LIMK2-203ENST00000340552 SIRPB1O00241 398 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 FUT6P51993 359 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 RAC3P60763 192 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 PMCHL1Q16048 86 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 ZNF324BQ6AW86 544 aaPredicted RBP12.84□□□□□ -0.35
LIMK2-203ENST00000340552 PCSK4Q6UW60 755 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 C19orf35Q6ZS72 473 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 MMD2Q8IY49 270 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 OR8I2Q8N0Y5 310 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 OR4P4Q8NGL7 312 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 NABP1Q96AH0 204 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 BORCS7Q96B45 105 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 BOKQ9UMX3 212 aaPredicted RBP12.84□□□□□ -0.35
LIMK2-203ENST00000340552 TRAV38-1A0A0B4J264 116 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 CORTO00230 105 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 HOXC12P31275 282 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 LINC00696Q6ZRV3 163 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 ST6GALNAC6Q969X2 333 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 SARAFQ96BY9 339 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 CHODLQ9H9P2 273 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 CELSR3Q9NYQ7 3312 aa12.84□□□□□ -0.35
LIMK2-203ENST00000340552 TRBV9A0A0B4J1U6 114 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 SRIP30626 198 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 GUCA1AP43080 201 aaPredicted RBP12.83□□□□□ -0.36
LIMK2-203ENST00000340552 CLDN15P56746 228 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
LIMK2-203ENST00000340552 FOXL2NBQ6ZUU3 175 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 GGNQ86UU5 652 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 OR52L2PQ8NGH6 319 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 HS3ST6Q96QI5 342 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 ESPL1Q14674 2120 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 DNPH1O43598 174 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 TOX4O94842 621 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 S100GP29377 79 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 TCF15Q12870 199 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 RPEL1Q2QD12 228 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 TMEM42Q69YG0 159 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 FAM58AQ8N1B3 248 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 OR2M7Q8NG81 312 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 SPTSSAQ969W0 71 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 FER1L6-AS2Q96M78 137 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 FAM173AQ9BQD7 235 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 HES7Q9BYE0 225 aa12.83□□□□□ -0.36
LIMK2-203ENST00000340552 H0YJW9 148 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 CELA3BP08861 270 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 HTD2P86397 168 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 OR1C1Q15619 314 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 ZNF611Q8N823 705 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 WASHC3Q9Y3C0 194 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 RHOBP62745 196 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 PSG9Q00887 426 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 SMIM21Q3B7S5 101 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 Q56UQ5 140 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 TMEM136Q6ZRR5 245 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 ATP23Q9Y6H3 246 aa12.82□□□□□ -0.36
LIMK2-203ENST00000340552 PMS2P5A8MQ11 134 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 CXCL13O43927 109 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 SRSF7Q16629 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIMK2-203ENST00000340552 ATP1A1-AS1Q5TC04 95 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 DEFB125Q8N687 156 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 TMEM54Q969K7 222 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 ZC2HC1AQ96GY0 325 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 IL36RNQ9UBH0 155 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 OR2W1Q9Y3N9 320 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 MUC21A0A0G2JKD1 596 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 MUC21A0A140T8X8 626 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 KIR2DS1A0A191URI9 304 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 BMPR1BO00238 502 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 ZNF16P17020 682 aaPredicted RBP12.81□□□□□ -0.36
LIMK2-203ENST00000340552 KIR2DS4P43632 304 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 KIR2DS1Q14954 304 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 MUC21Q5SSG8 566 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 BVES-AS1Q5T3Y7 98 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 PLCXD3Q63HM9 321 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 OR10D3Q8NH80 312 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 SF3B5Q9BWJ5 86 aaKnown RBP12.81□□□□□ -0.36
LIMK2-203ENST00000340552 NUDT3O95989 172 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 IGLV2-14P01704 120 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 SLC35B1P78383 322 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 IGFBP7Q16270 282 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 C10orf128Q5T292 105 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 FAM71F2Q6NXP2 309 aa12.81□□□□□ -0.36
LIMK2-203ENST00000340552 EBLN2Q6P2I7 272 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms