RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 DLK1P80370 383 aa5.8□□□□□ -1.48
NUP43-201ENST00000340413 HOXA4Q00056 320 aaPredicted RBP5.8□□□□□ -1.48
NUP43-201ENST00000340413 C2orf83Q53S99 150 aa5.8□□□□□ -1.48
NUP43-201ENST00000340413 CLLU1Q5K131 121 aa5.8□□□□□ -1.48
NUP43-201ENST00000340413 OR4A47Q6IF82 309 aa5.8□□□□□ -1.48
NUP43-201ENST00000340413 TEX261Q6UWH6 196 aa5.8□□□□□ -1.48
NUP43-201ENST00000340413 IGHV1-69DA0A0B4J2H0 117 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 M0QZK8 103 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 MOSP00540 346 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 IGHV1-69P01742 117 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 PAX9P55771 341 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 SAT2Q96F10 170 aaPredicted RBP5.79□□□□□ -1.48
NUP43-201ENST00000340413 OR5AC2Q9NZP5 309 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 UBQLN2Q9UHD9 624 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 AUP1Q9Y679 476 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 C2CD3Q4AC94 2353 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 USP9XQ93008 2570 aaPredicted RBP5.79□□□□□ -1.48
NUP43-201ENST00000340413 FGF16O43320 207 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 RAMP3O60896 148 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 GPX4P36969 197 aaPredicted RBP5.79□□□□□ -1.48
NUP43-201ENST00000340413 HTR2BP41595 481 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 GNG10P50151 68 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 RAB11AP62491 216 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 C5orf24Q7Z6I8 188 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 PNKDQ8N490 385 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 OR1S2Q8NGQ3 325 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 OR2G3Q8NGZ4 309 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 RNASEH2CQ8TDP1 164 aaKnown RBP5.79□□□□□ -1.48
NUP43-201ENST00000340413 RHOVQ96L33 236 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 RBKSQ9H477 322 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 CYTL1Q9NRR1 136 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 STRAPQ9Y3F4 350 aaKnown RBP5.79□□□□□ -1.48
NUP43-201ENST00000340413 IGHV4-61A0A0C4DH41 118 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 A0A0G2JRQ6 117 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 ANKRD34BA5PLL1 514 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 TRIM77I1YAP6 450 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 NPFFO15130 113 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 ARPC5O15511 151 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 EWSR1Q01844 656 aaKnown RBP eCLIP5.79□□□□□ -1.48
NUP43-201ENST00000340413 SCGB2A2Q13296 93 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 TMEM86BQ8N661 226 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 COMMD1Q8N668 190 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 TMEM252Q8N6L7 170 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 ATP5SQ99766 215 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 PAIP2BQ9ULR5 123 aaKnown RBP5.79□□□□□ -1.48
NUP43-201ENST00000340413 LRRK2Q5S007 2527 aa5.79□□□□□ -1.48
NUP43-201ENST00000340413 IGHV4-30-2A0A087WSY4 118 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 UMAD1C9J7I0 102 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 RNASEK-C17orf49H0YIS7 233 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 VENTXO95231 258 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 MDKP21741 143 aaPredicted RBP5.78□□□□□ -1.48
NUP43-201ENST00000340413 SUB1P53999 127 aaKnown RBP eCLIP5.78□□□□□ -1.487e-7■■■■□ 26.5
NUP43-201ENST00000340413 S100A10P60903 97 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 IFITM2Q01629 132 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 C1orf229Q6ZS94 237 aaPredicted RBP5.78□□□□□ -1.48
NUP43-201ENST00000340413 DTD1Q8TEA8 209 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 CACNG8Q8WXS5 425 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 HARBI1Q96MB7 349 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 NDUFA4L2Q9NRX3 87 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 GSKIPQ9P0R6 139 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 ANKHD1Q8IWZ3 2542 aaKnown RBP5.78□□□□□ -1.48
NUP43-201ENST00000340413 MPTX1A8MV57 137 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 SHOXO15266 292 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 CYB5BO43169 146 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 CRYZL1O95825 349 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 FAM106CPP0CH98 169 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 G6PCP35575 357 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 LGALS4P56470 323 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 RPL8P62917 257 aaKnown RBP5.78□□□□□ -1.48
NUP43-201ENST00000340413 PMS2P11Q13670 270 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 Q5BKY6 102 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 FAM209BQ5JX69 171 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 ST8SIA2Q92186 375 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 ZNF48Q96MX3 618 aaPredicted RBP5.78□□□□□ -1.48
NUP43-201ENST00000340413 ARL6Q9H0F7 186 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 ENY2Q9NPA8 101 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 PSENENQ9NZ42 101 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 IGSF10Q6WRI0 2623 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 A1L4Q6 167 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 LINC00862A6NCI5 91 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 FAM157AC9JC47 383 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 OR9G9P0C7N8 305 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 PSG5Q15238 335 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 Q6ZRM9 215 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 KRTAP1-3Q8IUG1 177 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 BAP18Q8IXM2 172 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 TMEM147Q9BVK8 224 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 TCF19Q9Y242 345 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 LSM5Q9Y4Y9 91 aaKnown RBP5.78□□□□□ -1.48
NUP43-201ENST00000340413 OR51B2Q9Y5P1 312 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 HIVEP3Q5T1R4 2406 aa5.78□□□□□ -1.48
NUP43-201ENST00000340413 CHST1O43916 411 aa5.77□□□□□ -1.49
NUP43-201ENST00000340413 SAA1P0DJI8 122 aaPredicted RBP5.77□□□□□ -1.49
NUP43-201ENST00000340413 PRSS8Q16651 343 aa5.77□□□□□ -1.49
NUP43-201ENST00000340413 LTC4SQ16873 150 aa5.77□□□□□ -1.49
NUP43-201ENST00000340413 TMEM249Q2WGJ8 235 aa5.77□□□□□ -1.49
NUP43-201ENST00000340413 CYB5R2Q6BCY4 276 aa5.77□□□□□ -1.49
NUP43-201ENST00000340413 ETFRF1Q6IPR1 90 aa5.77□□□□□ -1.49
NUP43-201ENST00000340413 REG4Q9BYZ8 158 aa5.77□□□□□ -1.49
NUP43-201ENST00000340413 DOPEY1Q5JWR5 2465 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms