RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 C2orf16Q68DN1 1984 aa12.36□□□□□ -0.43
RET-201ENST00000340058 IGHV3OR16-13A0A075B7E8 117 aa12.35□□□□□ -0.43
RET-201ENST00000340058 IGHV3-74A0A0B4J1X5 117 aa12.35□□□□□ -0.43
RET-201ENST00000340058 PPIAL4CA0A0B4J2A2 164 aa12.35□□□□□ -0.43
RET-201ENST00000340058 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
RET-201ENST00000340058 CEACAM18A8MTB9 384 aa12.35□□□□□ -0.43
RET-201ENST00000340058 HOXD4P09016 255 aaPredicted RBP12.35□□□□□ -0.43
RET-201ENST00000340058 PPIAL4GP0DN37 164 aa12.35□□□□□ -0.43
RET-201ENST00000340058 UCNP55089 124 aa12.35□□□□□ -0.43
RET-201ENST00000340058 HSPE1P61604 102 aaKnown RBP12.35□□□□□ -0.43
RET-201ENST00000340058 NRN1LQ496H8 165 aa12.35□□□□□ -0.43
RET-201ENST00000340058 MDS2Q8NDY4 140 aa12.35□□□□□ -0.43
RET-201ENST00000340058 TMEM18Q96B42 140 aa12.35□□□□□ -0.43
RET-201ENST00000340058 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
RET-201ENST00000340058 PCNX3Q9H6A9 2034 aa12.35□□□□□ -0.43
RET-201ENST00000340058 A1L4Q6 167 aa12.35□□□□□ -0.43
RET-201ENST00000340058 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
RET-201ENST00000340058 SERF2P84101 59 aa12.35□□□□□ -0.43
RET-201ENST00000340058 HIST3H3Q16695 136 aa12.35□□□□□ -0.43
RET-201ENST00000340058 IQCF6A8MYZ5 107 aa12.35□□□□□ -0.43
RET-201ENST00000340058 SLC31A2O15432 143 aa12.35□□□□□ -0.43
RET-201ENST00000340058 KHDC3LQ587J8 217 aa12.35□□□□□ -0.43
RET-201ENST00000340058 GCSAMQ8N6F7 178 aa12.35□□□□□ -0.43
RET-201ENST00000340058 LILRB1Q8NHL6 650 aaPredicted RBP12.35□□□□□ -0.43
RET-201ENST00000340058 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
RET-201ENST00000340058 RASL11BQ9BPW5 248 aa12.35□□□□□ -0.43
RET-201ENST00000340058 SS18L1O75177 396 aaPredicted RBP12.35□□□□□ -0.43
RET-201ENST00000340058 SRSF10O75494 262 aaKnown RBP12.35□□□□□ -0.43
RET-201ENST00000340058 SGMS2Q8NHU3 365 aa12.35□□□□□ -0.43
RET-201ENST00000340058 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
RET-201ENST00000340058 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
RET-201ENST00000340058 RCC1LQ96I51 464 aaKnown RBP12.35□□□□□ -0.43
RET-201ENST00000340058 AAMDCQ9H7C9 122 aa12.35□□□□□ -0.43
RET-201ENST00000340058 TMEM106BQ9NUM4 274 aa12.35□□□□□ -0.43
RET-201ENST00000340058 AMMECR1Q9Y4X0 333 aaPredicted RBP12.35□□□□□ -0.43
RET-201ENST00000340058 HELTA6NFD8 242 aa12.34□□□□□ -0.43
RET-201ENST00000340058 RRHO14718 337 aa12.34□□□□□ -0.43
RET-201ENST00000340058 QRFPP83859 136 aa12.34□□□□□ -0.43
RET-201ENST00000340058 TFF3Q07654 80 aa12.34□□□□□ -0.43
RET-201ENST00000340058 C10orf113Q5VZT2 155 aa12.34□□□□□ -0.43
RET-201ENST00000340058 FAM53AQ6NSI3 398 aaPredicted RBP12.34□□□□□ -0.43
RET-201ENST00000340058 NPIPB3Q92617 1050 aa12.34□□□□□ -0.43
RET-201ENST00000340058 NAGKQ9UJ70 344 aa12.34□□□□□ -0.43
RET-201ENST00000340058 JPT1Q9UK76 154 aa12.34□□□□□ -0.43
RET-201ENST00000340058 TRBV6-7A0A0A0MS04 114 aa12.34□□□□□ -0.43
RET-201ENST00000340058 COL4A3Q01955 1670 aa12.34□□□□□ -0.43
RET-201ENST00000340058 PLXNB3Q9ULL4 1909 aa12.34□□□□□ -0.43
RET-201ENST00000340058 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
RET-201ENST00000340058 KBTBD11O94819 623 aa12.34□□□□□ -0.43
RET-201ENST00000340058 CSRP1P21291 193 aaKnown RBP12.34□□□□□ -0.43
RET-201ENST00000340058 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
RET-201ENST00000340058 ZNF503-AS2A6NEH8 195 aa12.33□□□□□ -0.44
RET-201ENST00000340058 TRGC2P03986 189 aa12.33□□□□□ -0.44
RET-201ENST00000340058 S100A8P05109 93 aa12.33□□□□□ -0.44
RET-201ENST00000340058 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
RET-201ENST00000340058 IER3P46695 156 aa12.33□□□□□ -0.44
RET-201ENST00000340058 RSPO1Q2MKA7 263 aaPredicted RBP12.33□□□□□ -0.44
RET-201ENST00000340058 LY6HO94772 140 aa12.33□□□□□ -0.44
RET-201ENST00000340058 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
RET-201ENST00000340058 WFIKKN1Q96NZ8 548 aa12.33□□□□□ -0.44
RET-201ENST00000340058 AP4M1O00189 453 aa12.33□□□□□ -0.44
RET-201ENST00000340058 MOSP00540 346 aa12.33□□□□□ -0.44
RET-201ENST00000340058 CDKN1AP38936 164 aa12.33□□□□□ -0.44
RET-201ENST00000340058 ZNF137PP52743 207 aa12.33□□□□□ -0.44
RET-201ENST00000340058 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
RET-201ENST00000340058 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
RET-201ENST00000340058 OR5AU1Q8NGC0 362 aa12.33□□□□□ -0.44
RET-201ENST00000340058 CRIM1Q9NZV1 1036 aa12.33□□□□□ -0.44
RET-201ENST00000340058 ANOS1P23352 680 aa12.32□□□□□ -0.44
RET-201ENST00000340058 ERVFRD-1P60508 538 aa12.32□□□□□ -0.44
RET-201ENST00000340058 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
RET-201ENST00000340058 C20orf204Q6ZNR8 217 aa12.32□□□□□ -0.44
RET-201ENST00000340058 NDFIP1Q9BT67 221 aa12.32□□□□□ -0.44
RET-201ENST00000340058 MANBALQ9NQG1 85 aa12.32□□□□□ -0.44
RET-201ENST00000340058 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
RET-201ENST00000340058 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
RET-201ENST00000340058 TRAV20A0A0B4J274 112 aa12.32□□□□□ -0.44
RET-201ENST00000340058 CA2P00918 260 aa12.32□□□□□ -0.44
RET-201ENST00000340058 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
RET-201ENST00000340058 LHFPL1Q86WI0 220 aa12.32□□□□□ -0.44
RET-201ENST00000340058 TMEM167BQ9NRX6 74 aa12.32□□□□□ -0.44
RET-201ENST00000340058 THYN1Q9P016 225 aa12.32□□□□□ -0.44
RET-201ENST00000340058 S100A4P26447 101 aaKnown RBP12.32□□□□□ -0.44
RET-201ENST00000340058 S100A7P31151 101 aa12.32□□□□□ -0.44
RET-201ENST00000340058 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
RET-201ENST00000340058 FAM122AQ96E09 287 aa12.32□□□□□ -0.44
RET-201ENST00000340058 BRS3P32247 399 aa12.31□□□□□ -0.44
RET-201ENST00000340058 CCL20P78556 96 aa12.31□□□□□ -0.44
RET-201ENST00000340058 AARDQ4LEZ3 155 aa12.31□□□□□ -0.44
RET-201ENST00000340058 ASCL5Q7RTU5 278 aa12.31□□□□□ -0.44
RET-201ENST00000340058 MS4A10Q96PG2 267 aa12.31□□□□□ -0.44
RET-201ENST00000340058 WASHC3Q9Y3C0 194 aa12.31□□□□□ -0.44
RET-201ENST00000340058 TGIF2-C20orf24A0A0A6YYL0 155 aa12.31□□□□□ -0.44
RET-201ENST00000340058 C17orf100A8MU93 164 aa12.31□□□□□ -0.44
RET-201ENST00000340058 FXYD3Q14802 87 aa12.31□□□□□ -0.44
RET-201ENST00000340058 C1orf174Q8IYL3 243 aa12.31□□□□□ -0.44
RET-201ENST00000340058 ZCCHC14Q8WYQ9 949 aaKnown RBP12.31□□□□□ -0.44
RET-201ENST00000340058 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
RET-201ENST00000340058 CXorf1O96002 111 aa12.31□□□□□ -0.44
RET-201ENST00000340058 LGALS7P47929 136 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms