RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CXorf66Q5JRM2 361 aaPredicted RBP11.09□□□□□ -0.63
USP47-202ENST00000339865 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
USP47-202ENST00000339865 C3orf56Q8N813 242 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 A0A0U1RRA0 63 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 IMMP2LQ96T52 175 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 MIXL1Q9H2W2 232 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 ACER2Q5QJU3 275 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 TXNDC17Q9BRA2 123 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 A0A1B0GW15 77 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 RPL36A-HNRNPH2H7BZ11 118 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
USP47-202ENST00000339865 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 STARD6P59095 220 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 ELSPBP1Q96BH3 223 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 TMEM229AB2RXF0 380 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 FXYD1O00168 92 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 GUSBP11Q6P575 273 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 PRSS41Q7RTY9 318 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 CST9LQ9H4G1 147 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 MALRD1Q5VYJ5 2156 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 PLA2G10O15496 165 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 PLNP26678 52 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 NPC2P61916 151 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 HIKESHIQ53FT3 197 aa11.09□□□□□ -0.63
USP47-202ENST00000339865 H7C1H1 209 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 OGG1O15527 345 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 CEACAM5P06731 702 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 RPL32P62910 135 aaKnown RBP11.08□□□□□ -0.64
USP47-202ENST00000339865 DCAF10Q5QP82 559 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 DMKNQ6E0U4 476 aaPredicted RBP11.08□□□□□ -0.64
USP47-202ENST00000339865 JMJD8Q96S16 334 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 CISD1Q9NZ45 108 aaKnown RBP11.08□□□□□ -0.64
USP47-202ENST00000339865 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 C8orf88P0DMB2 117 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 SAMD5Q5TGI4 173 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 APCDD1LQ8NCL9 501 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 PTP4A3O75365 173 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 ADRA2AP08913 450 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 UNC119Q13432 240 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 TMEM252Q8N6L7 170 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 H0Y980 276 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 SRFP11831 508 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 LMO7DNF2Z398 122 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
USP47-202ENST00000339865 ANK1P16157 1881 aa11.08□□□□□ -0.64
USP47-202ENST00000339865 PTPRFP10586 1907 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 IGHV3-66A0A0C4DH42 116 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 SCTP09683 121 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 FAM219BQ5XKK7 198 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 LEPP41159 167 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 TNFRSF9Q07011 255 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 CBLN3Q6UW01 205 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 OR10W1Q8NGF6 305 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 LAMTOR3Q9UHA4 124 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 LINC01565O15544 149 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 FAM106AQ4KMX7 169 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 ZPLD1Q8TCW7 415 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 ITLN2Q8WWU7 325 aaPredicted RBP11.07□□□□□ -0.64
USP47-202ENST00000339865 PLSCR4Q9NRQ2 329 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 KLK8O60259 260 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 TRAV24A0A0B4J272 114 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 HIST1H2BAQ96A08 127 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 ZFP64Q9NPA5 681 aa11.07□□□□□ -0.64
USP47-202ENST00000339865 HBDP02042 147 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 RND2P52198 227 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 CLDND2Q8NHS1 167 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 GPR146Q96CH1 333 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 A0A1B0GUT8 65 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 PQLC2LA1A4F0 135 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 SPINT1O43278 529 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 ATXN8Q156A1 80 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 OR10J3Q5JRS4 329 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 UNQ5815/PRO19632Q6UWF5 114 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 NKX2-2O95096 273 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 ICAM4Q14773 271 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 ZNF658BQ4V348 819 aaPredicted RBP11.06□□□□□ -0.64
USP47-202ENST00000339865 PEAR1Q5VY43 1037 aaPredicted RBP11.06□□□□□ -0.64
USP47-202ENST00000339865 PMS2CLQ68D20 193 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 RBM38Q9H0Z9 239 aaKnown RBP11.06□□□□□ -0.64
USP47-202ENST00000339865 M0R2P5 195 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 IGHV5-51A0A0C4DH38 117 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 ZNF415Q09FC8 603 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
USP47-202ENST00000339865 NAPSAO96009 420 aa11.05□□□□□ -0.64
USP47-202ENST00000339865 FGFRL1Q8N441 504 aa11.05□□□□□ -0.64
USP47-202ENST00000339865 DUX3Q96PT4 197 aa11.05□□□□□ -0.64
USP47-202ENST00000339865 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
USP47-202ENST00000339865 PROB1E7EW31 1015 aa11.05□□□□□ -0.64
USP47-202ENST00000339865 CCL8P80075 99 aa11.05□□□□□ -0.64
USP47-202ENST00000339865 RSPO4Q2I0M5 234 aaPredicted RBP11.05□□□□□ -0.64
USP47-202ENST00000339865 MRPS18BQ9Y676 258 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms