RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TP53TG3Q9ULZ0 132 aa15.65■□□□□ 0.1
PSPC1-201ENST00000338910 DOCK11Q5JSL3 2073 aa15.65■□□□□ 0.1
PSPC1-201ENST00000338910 LINC00310P59036 64 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 YPEL3P61236 119 aaPredicted RBP15.64■□□□□ 0.09
PSPC1-201ENST00000338910 GNB1P62873 340 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 TCF23Q7RTU1 214 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 LRP11Q86VZ4 500 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 SPACA3Q8IXA5 215 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 FGFRL1Q8N441 504 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 ZNF71Q9NQZ8 489 aaPredicted RBP15.64■□□□□ 0.09
PSPC1-201ENST00000338910 HSPB7Q9UBY9 170 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 TRAV39A0A0B4J263 110 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 PMS2P5A8MQ11 134 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 IQCF6A8MYZ5 107 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 CECR9P0C854 216 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 C1QTNF9P0C862 333 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 DEFA4P12838 97 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 EGR1P18146 543 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 TFF3Q07654 80 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 RPRMLQ8N4K4 120 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 SGMS2Q8NHU3 365 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 NPCDR1Q9BY65 106 aa15.64■□□□□ 0.09
PSPC1-201ENST00000338910 GRIFINA4D1Z8 144 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 SIRPB1O00241 398 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 GFRA3O60609 400 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 CGAP01215 116 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 IL6RP08887 468 aaPredicted RBP15.63■□□□□ 0.09
PSPC1-201ENST00000338910 FABP6P51161 128 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 SELENOTP62341 195 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 PAFAH1B2P68402 229 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 Q6P435 159 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 C1orf162Q8NEQ5 155 aaPredicted RBP15.63■□□□□ 0.09
PSPC1-201ENST00000338910 PDE6DO43924 150 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 ZNF114Q8NC26 417 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 OR1L1Q8NH94 360 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 DERL1Q9BUN8 251 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 KCNS2Q9ULS6 477 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 POLDIP2Q9Y2S7 368 aa15.63■□□□□ 0.09
PSPC1-201ENST00000338910 IGF2RP11717 2491 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 MBD3L4A6NDZ8 208 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-201ENST00000338910 MBD3L3A6NE82 208 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-201ENST00000338910 MBD3L5A6NJ08 208 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-201ENST00000338910 NXPH2O95156 264 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 CRYAAP02489 173 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 ESDP10768 282 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 TPPP2P59282 170 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 MBD3L2Q8NHZ7 208 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-201ENST00000338910 RBFOX2O43251 390 aaKnown RBP eCLIP15.62■□□□□ 0.09
PSPC1-201ENST00000338910 OR2H2O95918 312 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 ERVK11-1P61568 191 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 RANP62826 216 aaKnown RBP15.62■□□□□ 0.09
PSPC1-201ENST00000338910 HOXA4Q00056 320 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-201ENST00000338910 TMEM183BQ1AE95 376 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 SFRP2Q96HF1 295 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 FAM215AQ9Y5M1 114 aa15.62■□□□□ 0.09
PSPC1-201ENST00000338910 PTPRQQ9UMZ3 2332 aa15.61■□□□□ 0.09
PSPC1-201ENST00000338910 NDUFB4O95168 129 aa15.61■□□□□ 0.09
PSPC1-201ENST00000338910 ATP5G3P48201 142 aa15.61■□□□□ 0.09
PSPC1-201ENST00000338910 ZNF826PQ6ZT77 177 aa15.61■□□□□ 0.09
PSPC1-201ENST00000338910 BHLHA15Q7RTS1 189 aaPredicted RBP15.61■□□□□ 0.09
PSPC1-201ENST00000338910 CLN8Q9UBY8 286 aa15.61■□□□□ 0.09
PSPC1-201ENST00000338910 PAM16Q9Y3D7 125 aa15.61■□□□□ 0.09
PSPC1-201ENST00000338910 RBM7Q9Y580 266 aaKnown RBP15.61■□□□□ 0.09
PSPC1-201ENST00000338910 DIDO1Q9BTC0 2240 aaKnown RBP15.61■□□□□ 0.09
PSPC1-201ENST00000338910 PGPEP1LA6NFU8 196 aa15.6■□□□□ 0.09
PSPC1-201ENST00000338910 CDC34P49427 236 aaPredicted RBP15.6■□□□□ 0.09
PSPC1-201ENST00000338910 PRR18Q8N4B5 295 aa15.6■□□□□ 0.09
PSPC1-201ENST00000338910 DRAM1Q8N682 238 aa15.6■□□□□ 0.09
PSPC1-201ENST00000338910 CDKN1AP38936 164 aa15.6■□□□□ 0.09
PSPC1-201ENST00000338910 VWC2Q2TAL6 325 aa15.6■□□□□ 0.09
PSPC1-201ENST00000338910 OR10P1Q8NGE3 313 aa15.6■□□□□ 0.09
PSPC1-201ENST00000338910 MSL2Q9HCI7 577 aa15.6■□□□□ 0.09
PSPC1-201ENST00000338910 TLN1Q9Y490 2541 aaKnown RBP15.6■□□□□ 0.09
PSPC1-201ENST00000338910 TRBV20OR9-2A0A075B6H5 130 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 IGHV1-18A0A0C4DH31 117 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 TIMM8AO60220 97 aaPredicted RBP15.59■□□□□ 0.09
PSPC1-201ENST00000338910 P0C879 139 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 DMRTA1Q5VZB9 504 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 Q8IYB0 196 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 ZNF709Q8N972 641 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 UBALD1Q8TB05 177 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 HSPB9Q9BQS6 159 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 VAMP8Q9BV40 100 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 KCNIP2Q9NS61 270 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 CEBPDP49716 269 aaPredicted RBP15.59■□□□□ 0.09
PSPC1-201ENST00000338910 TMEM249Q2WGJ8 235 aa15.59■□□□□ 0.09
PSPC1-201ENST00000338910 HEATR1Q9H583 2144 aaKnown RBP15.59■□□□□ 0.09
PSPC1-201ENST00000338910 IGHV2OR16-5A0A0B4J2B6 119 aa15.58■□□□□ 0.09
PSPC1-201ENST00000338910 SERF1AO75920 110 aa15.58■□□□□ 0.09
PSPC1-201ENST00000338910 IGLV1-44P01699 117 aa15.58■□□□□ 0.09
PSPC1-201ENST00000338910 BMP5P22003 454 aa15.58■□□□□ 0.09
PSPC1-201ENST00000338910 COMPP49747 757 aaPredicted RBP15.58■□□□□ 0.09
PSPC1-201ENST00000338910 UBE2G2P60604 165 aa15.58■□□□□ 0.09
PSPC1-201ENST00000338910 OR5I1Q13606 314 aa15.58■□□□□ 0.09
PSPC1-201ENST00000338910 PATZ1Q9HBE1 687 aaKnown RBP15.58■□□□□ 0.09
PSPC1-201ENST00000338910 LRRC30A6NM36 301 aa15.58■□□□□ 0.08
PSPC1-201ENST00000338910 SH2D1BO14796 132 aa15.58■□□□□ 0.08
PSPC1-201ENST00000338910 WNT9BO14905 357 aa15.58■□□□□ 0.08
PSPC1-201ENST00000338910 BATFQ16520 125 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms