RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 SS18L1O75177 396 aaPredicted RBP16.97■□□□□ 0.31
RUNX3-202ENST00000338888 P04436 131 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 SPATA46Q5T0L3 261 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 LYG1Q8N1E2 194 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 EAF1Q96JC9 268 aaPredicted RBP16.97■□□□□ 0.31
RUNX3-202ENST00000338888 PKIBQ9C010 78 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 V9GYV3 84 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 J3QT63 122 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 CEBPDP49716 269 aaPredicted RBP16.97■□□□□ 0.31
RUNX3-202ENST00000338888 TREML4Q6UXN2 200 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 POM121L2Q96KW2 1035 aa16.97■□□□□ 0.31
RUNX3-202ENST00000338888 OPRK1P41145 380 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 GFRA1P56159 465 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 SRYQ05066 204 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 NRN1LQ496H8 165 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 DCAF12Q5T6F0 453 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 ZBTB34Q8NCN2 500 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 SSMEM1Q8WWF3 244 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 MGST2Q99735 147 aa16.96■□□□□ 0.31
RUNX3-202ENST00000338888 TNRC6BQ9UPQ9 1833 aaKnown RBP16.96■□□□□ 0.31
RUNX3-202ENST00000338888 CFIP05156 583 aa16.96■□□□□ 0.3
RUNX3-202ENST00000338888 PRRX1P54821 245 aa16.96■□□□□ 0.3
RUNX3-202ENST00000338888 EIF4EBP1Q13541 118 aaPredicted RBP16.96■□□□□ 0.3
RUNX3-202ENST00000338888 GALMQ96C23 342 aa16.96■□□□□ 0.3
RUNX3-202ENST00000338888 KCNIP1Q9NZI2 227 aa16.96■□□□□ 0.3
RUNX3-202ENST00000338888 TRBV9A0A0B4J1U6 114 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 MMP23AO75900 390 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 TCL1AP56279 114 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 SPATA31B1PQ5VZV4 182 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 NIT1Q86X76 327 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 MS4A5Q9H3V2 200 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 COX11Q9Y6N1 276 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 ITGB1BP1O14713 200 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 ZNF324O75467 553 aaPredicted RBP16.95■□□□□ 0.3
RUNX3-202ENST00000338888 FOXH1O75593 365 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 NTF3P20783 257 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 GCHFRP30047 84 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 TSPOP30536 169 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 SRIP30626 198 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 OR10J3Q5JRS4 329 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 ALKBH7Q9BT30 221 aaPredicted RBP16.95■□□□□ 0.3
RUNX3-202ENST00000338888 GGTLC1Q9BX51 225 aa16.95■□□□□ 0.3
RUNX3-202ENST00000338888 LINC00473A8K010 186 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 C12orf77C9JDV5 145 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 PMS2CLQ68D20 193 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 LCN12Q6JVE5 192 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 TMEM136Q6ZRR5 245 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 WDR86Q86TI4 376 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 KLHDC1Q8N7A1 406 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 TCTEX1D1Q8N7M0 179 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 ZNF738Q8NE65 137 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 SEPSECSQ9HD40 501 aaKnown RBP16.94■□□□□ 0.3
RUNX3-202ENST00000338888 DOCK7Q96N67 2140 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 LOC105371242A0A075B767 164 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 OR9G9P0C7N8 305 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 CDKN1BP46527 198 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 FXYD3Q14802 87 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 RNF151Q2KHN1 245 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 ETFRF1Q6IPR1 90 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 TUSC5Q8IXB3 177 aa16.94■□□□□ 0.3
RUNX3-202ENST00000338888 SAA2-SAA4A0A096LPE2 208 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 NXPH2O95156 264 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 TIPARPQ7Z3E1 657 aaKnown RBP16.93■□□□□ 0.3
RUNX3-202ENST00000338888 SCCPDHQ8NBX0 429 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 RNASE7Q9H1E1 156 aaKnown RBP16.93■□□□□ 0.3
RUNX3-202ENST00000338888 WDR54Q9H977 334 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 LAMTOR5O43504 91 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 MPDU1O75352 247 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 TOMM40O96008 361 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 GDF1P27539 372 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 DOLPP1Q86YN1 238 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 TMEM45BQ96B21 275 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 BET1LQ9NYM9 111 aa16.93■□□□□ 0.3
RUNX3-202ENST00000338888 TRGV10A0A0A0MS01 117 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 PATE3B3GLJ2 98 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 K7EP13 123 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 CDIPTO14735 213 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 PSPNO60542 156 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 KLF7O75840 302 aaPredicted RBP16.92■□□□□ 0.3
RUNX3-202ENST00000338888 CX3CL1P78423 397 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 PILRBQ9UKJ0 227 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 C9JCJ5 164 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 CA2P00918 260 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 PLP2Q04941 152 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 MRPL54Q6P161 138 aaKnown RBP16.92■□□□□ 0.3
RUNX3-202ENST00000338888 WDR73Q6P4I2 378 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 TSKUQ8WUA8 353 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 BORCS7Q96B45 105 aa16.92■□□□□ 0.3
RUNX3-202ENST00000338888 FAM166BA8MTA8 275 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 BMPR1BO00238 502 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 HBZP02008 142 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 MT-ND6P03923 174 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 CLDN18P56856 261 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 NINJ1Q92982 152 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 HEYLQ9NQ87 328 aaPredicted RBP16.91■□□□□ 0.3
RUNX3-202ENST00000338888 SLC35D1Q9NTN3 355 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 IGHV3-43A0A0B4J1X8 118 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 IGHV3-43DP0DP04 118 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 CENPWQ5EE01 88 aa16.91■□□□□ 0.3
RUNX3-202ENST00000338888 TAAR6Q96RI8 345 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms