RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 HPRT1P00492 218 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 CELA3BP08861 270 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 GZMHP20718 246 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 SRP14P37108 136 aaKnown RBP8.94□□□□□ -0.98
RTN3-201ENST00000338850 FAM3BP58499 235 aaPredicted RBP8.94□□□□□ -0.98
RTN3-201ENST00000338850 SPCS3P61009 180 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 RPL30P62888 115 aaKnown RBP8.94□□□□□ -0.98
RTN3-201ENST00000338850 LCN2P80188 198 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 BSXQ3C1V8 233 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 ACOT6Q3I5F7 207 aaPredicted RBP8.94□□□□□ -0.98
RTN3-201ENST00000338850 FBXL19-AS1Q494R0 122 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 SPATA46Q5T0L3 261 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 ACSM6Q6P461 480 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 H2BFWTQ7Z2G1 175 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 OR10A7Q8NGE5 316 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 RNASE6Q93091 150 aaKnown RBP8.94□□□□□ -0.98
RTN3-201ENST00000338850 NEIL1Q96FI4 390 aaPredicted RBP8.94□□□□□ -0.98
RTN3-201ENST00000338850 ACY3Q96HD9 319 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 SMIM7Q9BQ49 75 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 NPCDR1Q9BY65 106 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 PLSCR4Q9NRQ2 329 aa8.94□□□□□ -0.98
RTN3-201ENST00000338850 USF3Q68DE3 2245 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 TRAV9-1A0A075B6T8 112 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 TGIF2-C20orf24A0A0A6YYL0 155 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 MBD3L4A6NDZ8 208 aaPredicted RBP8.93□□□□□ -0.98
RTN3-201ENST00000338850 MBD3L3A6NE82 208 aaPredicted RBP8.93□□□□□ -0.98
RTN3-201ENST00000338850 MBD3L5A6NJ08 208 aaPredicted RBP8.93□□□□□ -0.98
RTN3-201ENST00000338850 OR5H1A6NKK0 313 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 IFITM10A6NMD0 228 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 LINC00587B1AMM8 73 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 F6UZH7 168 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 PDE6DO43924 150 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 GGCTO75223 188 aaKnown RBP8.93□□□□□ -0.98
RTN3-201ENST00000338850 S1PR2O95136 353 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 NXPH3O95157 252 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 HRASP01112 189 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 IFNA10P01566 189 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 IGKV1D-33P01593 117 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 IGKV1-33P01594 117 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 FGF7P21781 194 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 MPV17P39210 176 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 PDLIM4P50479 330 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 ATP5IP56385 69 aaPredicted RBP8.93□□□□□ -0.98
RTN3-201ENST00000338850 BRWD1-AS2P59051 145 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 POU2AF1Q16633 256 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 IZUMO4Q1ZYL8 232 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 ZNF343Q6P1L6 599 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 GCSAMQ8N6F7 178 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 ZNF709Q8N972 641 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 OR51G1Q8NGK1 321 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 OR10G9Q8NGN4 311 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 OR10G7Q8NGN6 311 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 OR5R1Q8NH85 324 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 MBD3L2Q8NHZ7 208 aaPredicted RBP8.93□□□□□ -0.98
RTN3-201ENST00000338850 FAM222BQ8WU58 562 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 SNX22Q96L94 193 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 TRIB1Q96RU8 372 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 DSCAML1Q8TD84 2053 aa8.93□□□□□ -0.98
RTN3-201ENST00000338850 HRNRQ86YZ3 2850 aaPredicted RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 KIAA2026Q5HYC2 2103 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 TANC2Q9HCD6 1990 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 A6NNC1 897 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 MARCH11A6NNE9 402 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 C15orf62A8K5M9 175 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 C17orf98A8MV24 154 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 MGST3O14880 152 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 RAMP3O60896 148 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 TRGC2P03986 189 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 TRGC1P0CF51 173 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 HIST1H1BP16401 226 aaKnown RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 ZNF16P17020 682 aaPredicted RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 GCH1P30793 250 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 DUTP33316 252 aaKnown RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 OPRK1P41145 380 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 KIR2DL2P43627 348 aaPredicted RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 CDC34P49427 236 aaPredicted RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 RAB7AP51149 207 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 ERVS71-1P61550 626 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 RPL23P62829 140 aaKnown RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 ALKBH6Q3KRA9 238 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 PYY3Q5JQD4 70 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 NCMAPQ5T1S8 102 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 TMEM183AQ8IXX5 376 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 Q8N7P7 452 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 C9orf106Q8NAJ2 232 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 OR5B12Q96R08 314 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 TMEM204Q9BSN7 226 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 SFXN3Q9BWM7 321 aa8.92□□□□□ -0.98
RTN3-201ENST00000338850 MAP1AP78559 2803 aaPredicted RBP8.92□□□□□ -0.98
RTN3-201ENST00000338850 IGHV2OR16-5A0A0B4J2B6 119 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 PRSS46E5RG02 174 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 H7BYZ3 331 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 DVL1O14640 695 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 TIMM8AO60220 97 aaPredicted RBP8.91□□□□□ -0.98
RTN3-201ENST00000338850 GRPP07492 148 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 CECR9P0C854 216 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 PAX1P15863 534 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 G6PCP35575 357 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 GATA4P43694 442 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms