RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TINAGL1Q9GZM7 467 aaPredicted RBP11.77□□□□□ -0.53
PRKN-201ENST00000338468 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 SCOCQ9UIL1 159 aa11.77□□□□□ -0.53
PRKN-201ENST00000338468 COL7A1Q02388 2944 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 TEX22C9J3V5 150 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 H3BMQ9 156 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 K7EIL1 84 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 TPPPO94811 219 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 IL6RP08887 468 aaPredicted RBP11.76□□□□□ -0.53
PRKN-201ENST00000338468 MYOD1P15172 320 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 CD40LGP29965 261 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 SLURP1P55000 103 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 CATR1Q13166 79 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 DCUN1D4Q92564 292 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 DLX4Q92988 240 aaPredicted RBP11.76□□□□□ -0.53
PRKN-201ENST00000338468 ISOC1Q96CN7 298 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 PHB2Q99623 299 aa11.76□□□□□ -0.53
PRKN-201ENST00000338468 CCDC59Q9P031 241 aaKnown RBP11.76□□□□□ -0.53
PRKN-201ENST00000338468 TRAV3A0A0B4J244 114 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 HMX3A6NHT5 357 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 CGB1A6NKQ9 187 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 LINC01619G3V211 115 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 M0QYG6 137 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 CREBL2O60519 120 aaPredicted RBP11.75□□□□□ -0.53
PRKN-201ENST00000338468 S1PR2O95136 353 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 HPRT1P00492 218 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 HRASP01112 189 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 HSPB1P04792 205 aaKnown RBP11.75□□□□□ -0.53
PRKN-201ENST00000338468 RLN1P04808 185 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 TAS2R31P59538 309 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 ZNF45Q02386 682 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 AADACL3Q5VUY0 350 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 C11orf87Q6NUJ2 197 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 VSTM2AQ8TAG5 236 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 DPF1Q92782 380 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 COA4Q9NYJ1 87 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 MTFP1Q9UDX5 166 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 CEPT1Q9Y6K0 416 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 DNAH9Q9NYC9 4486 aa11.75□□□□□ -0.53
PRKN-201ENST00000338468 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 GPR31O00270 319 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 ACTL6BO94805 426 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 PRH1P02810 166 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 DGCR2P98153 550 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 ZNF585BQ52M93 769 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 C9orf66Q5T8R8 295 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 TTC9CQ8N5M4 171 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 CD300LFQ8TDQ1 290 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 BORCS5Q969J3 196 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 RSRP1Q9BUV0 290 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 SLIRPQ9GZT3 109 aaKnown RBP11.74□□□□□ -0.53
PRKN-201ENST00000338468 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
PRKN-201ENST00000338468 TRBV9A0A0B4J1U6 114 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 C13orf42A0A1B0GVH6 325 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 UPK2O00526 184 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 MPPED1O15442 326 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 RGS5O15539 181 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 CD3DP04234 171 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 NQO2P16083 231 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 HLA-GP17693 338 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 F2RP25116 425 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 MAS1LP35410 378 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 RPL27AP46776 148 aaKnown RBP11.73□□□□□ -0.53
PRKN-201ENST00000338468 UCP3P55916 312 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 TSPAN5P62079 268 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 RPL8P62917 257 aaKnown RBP11.73□□□□□ -0.53
PRKN-201ENST00000338468 PHLDA2Q53GA4 152 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 LHFPL1Q86WI0 220 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 OR4D10Q8NGI6 311 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 OR4A5Q8NH83 315 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 FCAMRQ8WWV6 532 aa11.73□□□□□ -0.53
PRKN-201ENST00000338468 DGCR14Q96DF8 476 aaKnown RBP11.73□□□□□ -0.53
PRKN-201ENST00000338468 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 OVOL1O14753 267 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 CD74P04233 296 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 AREGP15514 252 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 CMTM1Q8IZ96 169 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 AIFM2Q9BRQ8 373 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 NXF2Q9GZY0 626 aaKnown RBP11.72□□□□□ -0.53
PRKN-201ENST00000338468 AKIP1Q9NQ31 210 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 SLC2A9Q9NRM0 540 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 TMEM140Q9NV12 185 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 COMMD9Q9P000 198 aa11.72□□□□□ -0.53
PRKN-201ENST00000338468 ANKRD34BA5PLL1 514 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 GABARAPH6UMI1 98 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 RPA2P15927 270 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 LPAR6P43657 344 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 OR2B8PP59922 312 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms