RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CFHR4Q92496 578 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ARL6Q9H0F7 186 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 HSPB7Q9UBY9 170 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SVEP1Q4LDE5 3571 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 A0A0D9SG52 128 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OR2F2O95006 317 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TMEM50AO95807 157 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IGLV2-23P01705 113 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IL6RP08887 468 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 HKR1P10072 659 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 S100A11P31949 105 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 UBE2KP61086 200 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OR2F1Q13607 317 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ZNF345Q14585 488 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CCDC144NLQ6NUI1 221 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 PUSL1Q8N0Z8 303 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 MALSU1Q96EH3 234 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 RBKSQ9H477 322 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 BET1LQ9NYM9 111 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 UPK2O00526 184 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 AVPP01185 164 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IAPPP10997 89 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CD24P25063 80 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CD1BP29016 333 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 P2RY1P47900 373 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 LGALS7P47929 136 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 PAX9P55771 341 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OPCMLQ14982 345 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SPINK9Q5DT21 86 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 KCNRGQ8N5I3 272 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 AQP10Q96PS8 301 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ZC4H2Q9NQZ6 224 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 PDZD2O15018 2839 aa11.86□□□□□ -0.51
CDK5RAP3-201ENST00000338399 C15orf61A6NNL5 157 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 KBTBD11O94819 623 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 VENTXO95231 258 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IFNA17P01571 189 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CNTFRP26992 372 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 GPR157Q5UAW9 335 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 BRD3OSQ6XYD6 125 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 RAB40CQ96S21 281 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 FOXC2Q99958 501 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TNCP24821 2201 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 FAM24AA6NFZ4 105 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SLC25A17O43808 307 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 MED6O75586 246 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IGKV1D-33P01593 117 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IGKV1-33P01594 117 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 MYOD1P15172 320 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CAV2P51636 162 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 VMA21Q3ZAQ7 101 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CLEC9AQ6UXN8 241 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ZNF429Q86V71 674 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OR2C3Q8N628 320 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 NUP50Q9UKX7 468 aa11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-201ENST00000338399 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CEBPZOSA8MTT3 80 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 H3BP45 60 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 C4BPBP20851 252 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SPCS3P61009 180 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 HNF4GQ14541 408 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TMEM167AQ8TBQ9 72 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TMEM14BQ9NUH8 114 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 PRNDQ9UKY0 176 aa11.84□□□□□ -0.51
CDK5RAP3-201ENST00000338399 HECTD1Q9ULT8 2610 aa11.83□□□□□ -0.51
CDK5RAP3-201ENST00000338399 KANTRA0A1W2PQU2 76 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 GPR137BO60478 399 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SNRNP70P08621 437 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 RPL23AP62750 156 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 HES1Q14469 280 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PSG5Q15238 335 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FBLN7Q53RD9 439 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CIARTQ8N365 385 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR52E5Q8NH55 327 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SMIM8Q96KF7 97 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TSNAXQ99598 290 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TPSG1Q9NRR2 321 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR51B2Q9Y5P1 312 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 WSB1Q9Y6I7 421 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ITPR2Q14571 2701 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 J3QLI3 93 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 MOSP00540 346 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OPN1MWP04001 364 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms