RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CYP2G1PQ6ZSU1 146 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 PAQR4Q8N4S7 273 aaPredicted RBP11.68□□□□□ -0.54
RTN4-202ENST00000337526 OR4C13Q8NGP0 309 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 C19orf24Q9BVV8 132 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 SNCGO76070 127 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 GPR6P46095 362 aaPredicted RBP11.68□□□□□ -0.54
RTN4-202ENST00000337526 TMEM177Q53S58 311 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 Q6ZT83 130 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 NPIPB3Q92617 1050 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 LTBP1Q14766 1721 aa11.68□□□□□ -0.54
RTN4-202ENST00000337526 PATJQ8NI35 1801 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 KLF7O75840 302 aaPredicted RBP11.67□□□□□ -0.54
RTN4-202ENST00000337526 MGPP08493 103 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 PSMB2P49721 201 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 STPG1Q5TH74 334 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 SIGLEC12Q96PQ1 595 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 CBLN4Q9NTU7 201 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 K7ERU9 68 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 TMEM183AQ8IXX5 376 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 LOXL4Q96JB6 756 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 C1QTNF5Q9BXJ0 243 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 NPCDR1Q9BY65 106 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 RNF224P0DH78 156 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 CBLN1P23435 193 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 TWIST1Q15672 202 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 IMMP1LQ96LU5 166 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 ZNF703Q9H7S9 590 aaPredicted RBP11.67□□□□□ -0.54
RTN4-202ENST00000337526 UBTD1Q9HAC8 227 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 NYNRINQ9P2P1 1898 aaKnown RBP11.67□□□□□ -0.54
RTN4-202ENST00000337526 NOTCH3Q9UM47 2321 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 NDUFA2O43678 99 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 SOD3P08294 240 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 CTSSP25774 331 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 CKS2P33552 79 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 FGF11Q92914 225 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 PGLYRP4Q96LB8 373 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
RTN4-202ENST00000337526 ZNF319Q9P2F9 582 aa11.67□□□□□ -0.54
RTN4-202ENST00000337526 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 ZNF729A6NN14 1252 aaPredicted RBP11.66□□□□□ -0.54
RTN4-202ENST00000337526 FADS6Q8N9I5 356 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 MAS1LP35410 378 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 RPL39P5Q59GN2 51 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 SSBP3Q9BWW4 388 aaPredicted RBP11.66□□□□□ -0.54
RTN4-202ENST00000337526 FBLL1A6NHQ2 334 aaKnown RBP11.66□□□□□ -0.54
RTN4-202ENST00000337526 IFNL4K9M1U5 179 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 AMY1AP04745 511 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
RTN4-202ENST00000337526 CA7P43166 264 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 NRN1LQ496H8 165 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 AP5S1Q9NUS5 200 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 CADP27708 2225 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 IGLV3-12A0A075B6K2 115 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 H3BTX0 84 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 ZNF146Q15072 292 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 C21orf62-AS1Q17RA5 79 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 CENPWQ5EE01 88 aa11.66□□□□□ -0.54
RTN4-202ENST00000337526 PKDREJQ9NTG1 2253 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 C17orf98A8MV24 154 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 SIAH2O43255 324 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 GDF9O60383 454 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 LTBRP36941 435 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
RTN4-202ENST00000337526 TMEM78Q5T7P6 136 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 C12orf54Q6X4T0 127 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 FAM89BQ8N5H3 189 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 OR9G1Q8NH87 305 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 CA2P00918 260 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 REG1AP05451 166 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 DLX1P56177 255 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 LCN2P80188 198 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
RTN4-202ENST00000337526 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 RBPMS2Q6ZRY4 209 aaKnown RBP11.65□□□□□ -0.54
RTN4-202ENST00000337526 SRSF12Q8WXF0 261 aaKnown RBP11.65□□□□□ -0.54
RTN4-202ENST00000337526 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 GP6Q9HCN6 339 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 RALGAPA2Q2PPJ7 1873 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 ZNF207O43670 478 aaKnown RBP11.65□□□□□ -0.54
RTN4-202ENST00000337526 MST1P26927 711 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 ATP5IP56385 69 aaPredicted RBP11.65□□□□□ -0.54
RTN4-202ENST00000337526 SRSF3P84103 164 aaKnown RBP11.65□□□□□ -0.54
RTN4-202ENST00000337526 TMEM56-RWDD3S4R434 201 aa11.65□□□□□ -0.54
RTN4-202ENST00000337526 SBF1O95248 1867 aa11.65□□□□□ -0.55
RTN4-202ENST00000337526 F8VVB4 439 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 F8VWA3 439 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 FOLR2P14207 255 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 EAF1Q96JC9 268 aaPredicted RBP11.64□□□□□ -0.55
RTN4-202ENST00000337526 TUBA4BQ9H853 241 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 MPDZO75970 2070 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 TMEM186Q96B77 213 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 OR4C46A6NHA9 309 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 IL6RP08887 468 aaPredicted RBP11.64□□□□□ -0.55
RTN4-202ENST00000337526 ACP7Q6ZNF0 438 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 GSN-AS1Q9NRJ2 163 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 TRBV9A0A0B4J1U6 114 aa11.64□□□□□ -0.55
RTN4-202ENST00000337526 A0A0G2JMM0 328 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms