RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 C9orf62Q8N4C0 152 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 GPR146Q96CH1 333 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 SLC35B3Q9H1N7 401 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 PARP11Q9NR21 331 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 MINOS1-NBL1R4GNA1 71 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 SCN8AQ9UQD0 1980 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 UBE2L5PA0A1B0GUS4 154 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 ADAM10O14672 748 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 IGLV3-1P01715 115 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 UBE2L3P68036 154 aaKnown RBP5.74□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF524Q96C55 264 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 KIAA1671Q9BY89 1806 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 A0A0G2JLM5 398 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 RPL7P18124 248 aaKnown RBP5.74□□□□□ -1.49
SF3B1-201ENST00000335508 GNLYP22749 145 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 KHDC3LQ587J8 217 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 FAM162BQ5T6X4 162 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 FAM78BQ5VT40 261 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 OR5R1Q8NH85 324 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 C7orf69Q9H7B7 122 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 PCDH15Q96QU1 1955 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 C1QTNF9BB2RNN3 333 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 CLDN34H7C241 214 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 SMAD7O15105 426 aaKnown RBP5.74□□□□□ -1.49
SF3B1-201ENST00000335508 HYPMO75409 117 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 C1QTNF9P0C862 333 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 ADIRFQ15847 76 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF818PQ6ZRF7 136 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 OR11H7Q8NGC8 314 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 TCEAL7Q9BRU2 100 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF257Q9Y2Q1 563 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 G6PCP35575 357 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 FLI1Q01543 452 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-201ENST00000335508 Q56UQ5 140 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 BPIFA4PQ86YQ2 179 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 GFI1Q99684 422 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 TMEM204Q9BSN7 226 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 RSRP1Q9BUV0 290 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 ARL16Q0P5N6 197 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 CXorf66Q5JRM2 361 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-201ENST00000335508 FFAR4Q5NUL3 377 aa5.74□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF430Q9H8G1 570 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-201ENST00000335508 A0A1W2PS18 150 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF737O75373 536 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 MAS1LP35410 378 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 REG1BP48304 166 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 DLK1P80370 383 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 QRFPP83859 136 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 PERPQ96FX8 193 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 OR51B2Q9Y5P1 312 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 DENND4CQ5VZ89 1909 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 ELOA3CA0A087WX78 387 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 RPL11P62913 178 aaKnown RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 ANKRD55Q3KP44 614 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 SLC35E3Q7Z769 313 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 OR5T1Q8NG75 326 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 FRZBQ92765 325 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 CCL19Q99731 98 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 NPFFR1Q9GZQ6 430 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 C2orf16Q68DN1 1984 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 A0A1W2PPE3 182 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 TMEM250H0YL14 139 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 J3QKU1 62 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 DUTP33316 252 aaKnown RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 MORN2Q502X0 79 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 TMEM41BQ5BJD5 291 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 OR4A5Q8NH83 315 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 TAF15Q92804 592 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 CLEC5AQ9NY25 188 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 ELF5Q9UKW6 265 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 M0R1W7 72 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 RBP4P02753 201 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 PLA2G5P39877 138 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 RPS10P46783 165 aaKnown RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 SULT1A2P50226 295 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 MFAP4P55083 255 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 H2BFSP57053 126 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 PAFAH1B2P68402 229 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF124Q15973 351 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 FAM71F2Q6NXP2 309 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 WDFY1Q8IWB7 410 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 ADAD2Q8NCV1 583 aaKnown RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 OR4C12Q96R67 309 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 DCTN5Q9BTE1 182 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF331Q9NQX6 463 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 IGKV1-27A0A075B6S5 117 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 DEDDO75618 318 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 CEBPDP49716 269 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 UNQ5815/PRO19632Q6UWF5 114 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 OR52E5Q8NH55 327 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 RXFP4Q8TDU9 374 aa5.73□□□□□ -1.49
SF3B1-201ENST00000335508 METTL1Q9UBP6 276 aaKnown RBP5.73□□□□□ -1.49
SF3B1-201ENST00000335508 SCO1O75880 301 aa5.72□□□□□ -1.49
SF3B1-201ENST00000335508 ZNF735P0CB33 412 aa5.72□□□□□ -1.49
SF3B1-201ENST00000335508 SPP1P10451 314 aa5.72□□□□□ -1.49
SF3B1-201ENST00000335508 NTF4P34130 210 aa5.72□□□□□ -1.49
SF3B1-201ENST00000335508 CDKN1AP38936 164 aa5.72□□□□□ -1.49
SF3B1-201ENST00000335508 FAM74A3Q4VXF1 159 aa5.72□□□□□ -1.49
SF3B1-201ENST00000335508 FAM201AQ5SY85 155 aa5.72□□□□□ -1.49
SF3B1-201ENST00000335508 BOD1L2Q8IYS8 172 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms