RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 IL22RA2Q969J5 263 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 TET2Q6N021 2002 aaPredicted RBP13.87□□□□□ -0.19
CHGA-202ENST00000334654 hCG_2014768A0A024R1R8 64 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 TRAV3A0A0B4J244 114 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 C7orf66A4D0T2 115 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 M0QZK8 103 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 ANXA3P12429 323 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 RPL15P61313 204 aaKnown RBP13.87□□□□□ -0.19
CHGA-202ENST00000334654 VMA21Q3ZAQ7 101 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 TMEM268Q5VZI3 342 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 PPP1R27Q86WC6 154 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 TMEM167AQ8TBQ9 72 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 BET1LQ9NYM9 111 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 KIAA1456Q9P272 454 aa13.87□□□□□ -0.19
CHGA-202ENST00000334654 TRIM77I1YAP6 450 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 KBTBD11O94819 623 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 OR2A4O95047 310 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 HLA-DRB1P01911 266 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 OR9G9P0C7N8 305 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 IZUMO4Q1ZYL8 232 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 LIN54Q6MZP7 749 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 LYZL2Q7Z4W2 148 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 ZNF695Q8IW36 515 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 LGI3Q8N145 548 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 SLC35G3Q8N808 338 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 ZNF431Q8TF32 576 aaPredicted RBP13.86□□□□□ -0.19
CHGA-202ENST00000334654 MITD1Q8WV92 249 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 OR2A7Q96R45 310 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 RASL11BQ9BPW5 248 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 HSPB9Q9BQS6 159 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 AIFM2Q9BRQ8 373 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 ZNF702PQ9H963 129 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 GPN1Q9HCN4 374 aaPredicted RBP13.86□□□□□ -0.19
CHGA-202ENST00000334654 TMEM140Q9NV12 185 aa13.86□□□□□ -0.19
CHGA-202ENST00000334654 HMX3A6NHT5 357 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 LINC01548A6NM66 108 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 UPK2O00526 184 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 PRSS8Q16651 343 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 Q6ZRM9 215 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 Q6ZSV7 163 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 Q8N2B8 174 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 DMBX1Q8NFW5 382 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 CLCC1Q96S66 551 aa13.85□□□□□ -0.19
CHGA-202ENST00000334654 ZNF430Q9H8G1 570 aaPredicted RBP13.85□□□□□ -0.19
CHGA-202ENST00000334654 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 A0A0B4J2A0 478 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 DBX1A6NMT0 343 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 SNRPGP15A8MWD9 76 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 TSPAN9O75954 239 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 CX3CL1P78423 397 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 SRPXP78539 464 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 NMSQ5H8A3 153 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 VSTM2AQ8TAG5 236 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 NPFFR1Q9GZQ6 430 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 SHPKQ9UHJ6 478 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 MMP24Q9Y5R2 645 aa13.84□□□□□ -0.19
CHGA-202ENST00000334654 CA2P00918 260 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 IGHG2P01859 326 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 ERVK-16P61578 105 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 NDPQ00604 133 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 PLGLAQ15195 96 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 OR4A5Q8NH83 315 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 LSM10Q969L4 123 aaKnown RBP13.83□□□□□ -0.2
CHGA-202ENST00000334654 GPR146Q96CH1 333 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 NEURL2Q9BR09 285 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 PRSS22Q9GZN4 317 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 RANBP3Q9H6Z4 567 aaPredicted RBP13.83□□□□□ -0.2
CHGA-202ENST00000334654 NSG2Q9Y328 171 aa13.83□□□□□ -0.2
CHGA-202ENST00000334654 FBN1P35555 2871 aaKnown RBP13.83□□□□□ -0.2
CHGA-202ENST00000334654 DUXBA0A1W2PPF3 345 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 EGR2P11161 476 aaPredicted RBP13.82□□□□□ -0.2
CHGA-202ENST00000334654 MYOD1P15172 320 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 VDAC1P21796 283 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 AKR1C2P52895 323 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 ZNF562Q6V9R5 426 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 H2BFWTQ7Z2G1 175 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 C12orf45Q8N5I9 185 aaPredicted RBP13.82□□□□□ -0.2
CHGA-202ENST00000334654 COQ8AQ8NI60 647 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 FBXO7Q9Y3I1 522 aa13.82□□□□□ -0.2
CHGA-202ENST00000334654 A0A1B0GW64 132 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 E7EUB6 86 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 ADAP1O75689 374 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 ATG12O94817 140 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 FGF2P09038 288 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 FAM219AQ8IW50 185 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 MMD2Q8IY49 270 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 PHB2Q99623 299 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 C16orf95Q9H693 158 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 ALG5Q9Y673 324 aa13.81□□□□□ -0.2
CHGA-202ENST00000334654 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 NDUFA7O95182 113 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 CRYBA1P05813 215 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 HOXB5P09067 269 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 RRAS2P62070 204 aaPredicted RBP13.8□□□□□ -0.2
CHGA-202ENST00000334654 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
CHGA-202ENST00000334654 C2orf68Q2NKX9 166 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 C9orf152Q5JTZ5 239 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 C10orf55Q5SWW7 151 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 GGNBP1Q5YKI7 109 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms