RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 ZNF672Q499Z4 452 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-201ENST00000333617 AARDQ4LEZ3 155 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 SPINK9Q5DT21 86 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 TMEM200BQ69YZ2 307 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 H1FXQ92522 213 aaKnown RBP7.14□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF714Q96N38 554 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF251Q9BRH9 671 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 PSMG3Q9BT73 122 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-201ENST00000333617 PBDC1Q9BVG4 233 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 QTRT1Q9BXR0 403 aaKnown RBP7.14□□□□□ -1.27
LSAMP-201ENST00000333617 PARD6GQ9BYG4 376 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-201ENST00000333617 EIF5A2Q9GZV4 153 aaKnown RBP7.14□□□□□ -1.27
LSAMP-201ENST00000333617 KAAG1Q9UBP8 84 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 FBXO7Q9Y3I1 522 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 UBE2L5PA0A1B0GUS4 154 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 A0A1B0GV50 99 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 BTBD17A6NE02 478 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 FAM157AC9JC47 383 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 DVL1O14640 695 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 PPIHO43447 177 aaKnown RBP7.13□□□□□ -1.27
LSAMP-201ENST00000333617 FCN3O75636 299 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 SCAF4O95104 1147 aaKnown RBP7.13□□□□□ -1.27
LSAMP-201ENST00000333617 SPCS3P61009 180 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 RAB2AP61019 212 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 LY6DQ14210 128 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 CDSNQ15517 529 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 GUCA2BQ16661 112 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 HEPN1Q6WQI6 88 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
LSAMP-201ENST00000333617 VKORC1L1Q8N0U8 176 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF383Q8NA42 475 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 OR52E5Q8NH55 327 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 PINX1Q96BK5 328 aaKnown RBP7.13□□□□□ -1.27
LSAMP-201ENST00000333617 RAB39BQ96DA2 213 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 CLCC1Q96S66 551 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 RSG1Q9BU20 258 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 WDR61Q9GZS3 305 aaKnown RBP7.13□□□□□ -1.27
LSAMP-201ENST00000333617 TMEM140Q9NV12 185 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 IGSF10Q6WRI0 2623 aa7.13□□□□□ -1.27
LSAMP-201ENST00000333617 CFAP46Q8IYW2 2715 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 A0A1B0GW64 132 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 C9JQL5 133 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 SNAPINO95295 136 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 HRASP01112 189 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 HBE1P02100 147 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 CCL3L1P16619 93 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 PPT1P50897 306 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 RPP30P78346 268 aaKnown RBP7.12□□□□□ -1.27
LSAMP-201ENST00000333617 SERF2P84101 59 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF124Q15973 351 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 PDLIM3Q53GG5 364 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-201ENST00000333617 PUSL1Q8N0Z8 303 aaKnown RBP7.12□□□□□ -1.27
LSAMP-201ENST00000333617 OR10P1Q8NGE3 313 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 TAF15Q92804 592 aaKnown RBP eCLIP7.12□□□□□ -1.27
LSAMP-201ENST00000333617 TMEM204Q9BSN7 226 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 TMEM147Q9BVK8 224 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 SCRT1Q9BWW7 348 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 CTSZQ9UBR2 303 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 KPTNQ9Y664 436 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 AKAP6Q13023 2319 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 ACACBO00763 2458 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 TRAV3A0A0B4J244 114 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 C15orf61A6NNL5 157 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 PMS2P5A8MQ11 134 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 DNASE2O00115 360 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-201ENST00000333617 CT45A6P0DMU7 189 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 CT45A5P0DMU8 189 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 CT45A7P0DMV0 189 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 LOXP28300 417 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-201ENST00000333617 PPOXP50336 477 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 ERVFRD-1P60508 538 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 GNB2P62879 340 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 RTL8BQ17RB0 113 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 DHRS7BQ6IAN0 325 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-201ENST00000333617 OR4A47Q6IF82 309 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 SPSB3Q6PJ21 355 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF833PQ6ZTB9 187 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF429Q86V71 674 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 SFT2D1Q8WV19 159 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 RHOVQ96L33 236 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 HIPK2Q9H2X6 1198 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 SLC35D1Q9NTN3 355 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 ZNRD1Q9P1U0 126 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 TIMM9Q9Y5J7 89 aa7.12□□□□□ -1.27
LSAMP-201ENST00000333617 TRBV23-1A0A0A0MS06 115 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 RBFOX3A6NFN3 312 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 C15orf62A8K5M9 175 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 TSPAN4O14817 238 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 NUPL2O15504 423 aaKnown RBP7.11□□□□□ -1.27
LSAMP-201ENST00000333617 ARG1P05089 322 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 RPS16P62249 146 aaKnown RBP7.11□□□□□ -1.27
LSAMP-201ENST00000333617 CCL20P78556 96 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 TFF3Q07654 80 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 POU2AF1Q16633 256 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 MLANAQ16655 118 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 TMEM41BQ5BJD5 291 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 C8orf31Q8N9H6 132 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 RBMXL1Q96E39 390 aaKnown RBP7.11□□□□□ -1.27
LSAMP-201ENST00000333617 AIFM2Q9BRQ8 373 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 SMDT1Q9H4I9 107 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms