RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MYOD1P15172 320 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 MSMPQ1L6U9 139 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 C9orf106Q8NAJ2 232 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 ZNRF1Q8ND25 227 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 OR5R1Q8NH85 324 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 ANAPC16Q96DE5 110 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 MS4A5Q9H3V2 200 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 HEYLQ9NQ87 328 aaPredicted RBP10.2□□□□□ -0.78
VPS33B-201ENST00000333371 A0A1W2PPV4 95 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 J3QW42 95 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 SLC31A2O15432 143 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 OR4A8P0C604 315 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 KIR2DL2P43627 348 aaPredicted RBP10.2□□□□□ -0.78
VPS33B-201ENST00000333371 THBS3P49746 956 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 FAM201AQ5SY85 155 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 INO80CQ6PI98 192 aaPredicted RBP10.2□□□□□ -0.78
VPS33B-201ENST00000333371 TMEM256Q8N2U0 113 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 OR2Z1Q8NG97 314 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 MISP3Q96FF7 219 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 HSD17B10Q99714 261 aaKnown RBP10.2□□□□□ -0.78
VPS33B-201ENST00000333371 MGST2Q99735 147 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 DUSP13Q9UII6 198 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 SCO2A0A1W2PP80 73 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 IGKV3-15P01624 115 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 CD33P20138 364 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 HOXC12P31275 282 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 PRDX2P32119 198 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 TCF15Q12870 199 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 SSX2Q16385 188 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 SPATA31B1PQ5VZV4 182 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 IGFL2Q6UWQ7 119 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 SARAFQ96BY9 339 aa10.2□□□□□ -0.78
VPS33B-201ENST00000333371 ADGRG4Q8IZF6 3080 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 IGKV1D-17A0A075B6S4 117 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 SPINT2O43291 252 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 SMIM21Q3B7S5 101 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 COA6Q5JTJ3 125 aaKnown RBP10.19□□□□□ -0.78
VPS33B-201ENST00000333371 MRPL41Q8IXM3 137 aaKnown RBP10.19□□□□□ -0.78
VPS33B-201ENST00000333371 OR4A16Q8NH70 328 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 TANC2Q9HCD6 1990 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 PCNX1Q96RV3 2341 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 PRR33A8MZF0 331 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 IGF2-ASQ6U949 168 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 RNASEH2CQ8TDP1 164 aaKnown RBP10.19□□□□□ -0.78
VPS33B-201ENST00000333371 LURAP1Q96LR2 239 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 PXMP4Q9Y6I8 212 aa10.19□□□□□ -0.78
VPS33B-201ENST00000333371 KALRNO60229 2985 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 A8MWP6 167 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 MORN2Q502X0 79 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 DUX4L9Q6RFH8 374 aaPredicted RBP10.18□□□□□ -0.78
VPS33B-201ENST00000333371 ZADH2Q8N4Q0 377 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 SGMS2Q8NHU3 365 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 PRR7Q8TB68 274 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 FAM122AQ96E09 287 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 OPN3Q9H1Y3 402 aaPredicted RBP10.18□□□□□ -0.78
VPS33B-201ENST00000333371 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 VENTXO95231 258 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 GCH1P30793 250 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 CNN1P51911 297 aaKnown RBP10.18□□□□□ -0.78
VPS33B-201ENST00000333371 RPL15P61313 204 aaKnown RBP10.18□□□□□ -0.78
VPS33B-201ENST00000333371 PDLIM3Q53GG5 364 aaPredicted RBP10.18□□□□□ -0.78
VPS33B-201ENST00000333371 DIRC2Q96SL1 478 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 GGTLC1Q9BX51 225 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 SEPSECSQ9HD40 501 aaKnown RBP10.18□□□□□ -0.78
VPS33B-201ENST00000333371 YTHDF2Q9Y5A9 579 aaKnown RBP10.18□□□□□ -0.78
VPS33B-201ENST00000333371 TRAPPC1Q9Y5R8 145 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 PLXNB1O43157 2135 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 ATMQ13315 3056 aa10.18□□□□□ -0.78
VPS33B-201ENST00000333371 RAI1Q7Z5J4 1906 aaPredicted RBP10.17□□□□□ -0.78
VPS33B-201ENST00000333371 IGHV1-18A0A0C4DH31 117 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 GFRA3O60609 400 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 FOXH1O75593 365 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 FRMD6-AS1P0C7T7 363 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 SRP14P37108 136 aaKnown RBP10.17□□□□□ -0.78
VPS33B-201ENST00000333371 PDLIM4P50479 330 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 PRSS33Q8NF86 280 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 ACY3Q96HD9 319 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 IMMP2LQ96T52 175 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 GVINP1Q7Z2Y8 2422 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 ZFHX2Q9C0A1 2572 aaPredicted RBP10.17□□□□□ -0.78
VPS33B-201ENST00000333371 IGHV2OR16-5A0A0B4J2B6 119 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 PRSS46E5RG02 174 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 SLC17A3O00476 420 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 TYMSP04818 313 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 VDAC2P45880 294 aaPredicted RBP10.17□□□□□ -0.78
VPS33B-201ENST00000333371 RELBQ01201 579 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 DNLZQ5SXM8 178 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 KCNIP4Q6PIL6 250 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 CISD2Q8N5K1 135 aaKnown RBP10.17□□□□□ -0.78
VPS33B-201ENST00000333371 OCC1Q8TAD7 63 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
VPS33B-201ENST00000333371 HPRT1P00492 218 aa10.16□□□□□ -0.78
VPS33B-201ENST00000333371 PAX1P15863 534 aa10.16□□□□□ -0.78
VPS33B-201ENST00000333371 USF2Q15853 346 aaPredicted RBP10.16□□□□□ -0.78
VPS33B-201ENST00000333371 HLA-DRB5Q30154 266 aa10.16□□□□□ -0.78
VPS33B-201ENST00000333371 ZNF718Q3SXZ3 478 aa10.16□□□□□ -0.78
VPS33B-201ENST00000333371 VHLLQ6RSH7 139 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms