RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 FAM19A2Q8N3H0 131 aa13.48□□□□□ -0.25
SLIT3-201ENST00000332966 WDR31Q8NA23 367 aa13.48□□□□□ -0.25
SLIT3-201ENST00000332966 CT55Q8WUE5 264 aa13.48□□□□□ -0.25
SLIT3-201ENST00000332966 OR2T8A6NH00 312 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 MMDQ15546 238 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 PGLYRP4Q96LB8 373 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 PTGDSP41222 190 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 UCP2P55851 309 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 HBBP68871 147 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 SRSF7Q16629 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
SLIT3-201ENST00000332966 SLC35E4Q6ICL7 350 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 ZNF324O75467 553 aaPredicted RBP13.47□□□□□ -0.25
SLIT3-201ENST00000332966 Q1RN00 199 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 REPIN1Q9BWE0 567 aaKnown RBP13.47□□□□□ -0.25
SLIT3-201ENST00000332966 DLL1O00548 723 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 RRHO14718 337 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 CGAP01215 116 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 CEBPDP49716 269 aaPredicted RBP13.47□□□□□ -0.25
SLIT3-201ENST00000332966 TMEM177Q53S58 311 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 GNB1LQ9BYB4 327 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
SLIT3-201ENST00000332966 JPT1Q9UK76 154 aa13.47□□□□□ -0.25
SLIT3-201ENST00000332966 TRAV9-2A0A087WT02 112 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 PRNTQ86SH4 94 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 WFDC8Q8IUA0 241 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 GCSAMQ8N6F7 178 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 RNF7Q9UBF6 113 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 CLDN18P56856 261 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 PLAURQ03405 335 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 DCAF10Q5QP82 559 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 HES3Q5TGS1 186 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 GUCD1Q96NT3 240 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 RBPJQ06330 500 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 OR10J3Q5JRS4 329 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 ZNF441Q8N8Z8 693 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 RASL11BQ9BPW5 248 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 ANAPC10Q9UM13 185 aa13.46□□□□□ -0.25
SLIT3-201ENST00000332966 CHCHD2Q9Y6H1 151 aaPredicted RBP13.46□□□□□ -0.25
SLIT3-201ENST00000332966 S100A4P26447 101 aaKnown RBP13.46□□□□□ -0.26
SLIT3-201ENST00000332966 ZNF826PQ6ZT77 177 aa13.46□□□□□ -0.26
SLIT3-201ENST00000332966 RNF144BQ7Z419 303 aa13.46□□□□□ -0.26
SLIT3-201ENST00000332966 RAB37Q96AX2 223 aa13.46□□□□□ -0.26
SLIT3-201ENST00000332966 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 C17orf98A8MV24 154 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 TNFSF15O95150 251 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 NRN1LQ496H8 165 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 ACSF3Q4G176 576 aaPredicted RBP13.45□□□□□ -0.26
SLIT3-201ENST00000332966 RPEQ96AT9 228 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 SLC25A33Q9BSK2 321 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 ZNF146Q15072 292 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 RPP25LQ8N5L8 163 aaKnown RBP13.45□□□□□ -0.26
SLIT3-201ENST00000332966 OCC1Q8TAD7 63 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 DUSP15Q9H1R2 295 aaPredicted RBP13.45□□□□□ -0.26
SLIT3-201ENST00000332966 MS4A5Q9H3V2 200 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 HIGD1AQ9Y241 93 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 LOC389332A0A1B0GUA5 103 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 FADS6Q8N9I5 356 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 ZNF837Q96EG3 531 aaPredicted RBP13.45□□□□□ -0.26
SLIT3-201ENST00000332966 CDX2Q99626 313 aaPredicted RBP13.45□□□□□ -0.26
SLIT3-201ENST00000332966 TRAV17A0A0B4J275 112 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 C12orf77C9JDV5 145 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 GDF9O60383 454 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 C1orf174Q8IYL3 243 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 LINC00470Q9BZP3 86 aa13.45□□□□□ -0.26
SLIT3-201ENST00000332966 RTTNQ86VV8 2226 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 LINC00271P0C7V0 271 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 PCOLCEQ15113 449 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 LINC01551Q86U37 167 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 SNRNP40Q96DI7 357 aaKnown RBP13.44□□□□□ -0.26
SLIT3-201ENST00000332966 TIMD4Q96H15 378 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 IGKV1-12A0A0C4DH73 117 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 J3QW42 95 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 MT-CO3P00414 261 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 IGKV1D-12P01611 117 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 PRRX1P54821 245 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 ARF6P62330 175 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 TBR1Q16650 682 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 OSTCQ9NRP0 149 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 IGLV3-32A0A0A0MS00 114 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 CD55P08174 381 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 RPL13AP40429 203 aaKnown RBP13.44□□□□□ -0.26
SLIT3-201ENST00000332966 RPL11P62913 178 aaKnown RBP13.44□□□□□ -0.26
SLIT3-201ENST00000332966 PCSK4Q6UW60 755 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 EAF1Q96JC9 268 aaPredicted RBP13.44□□□□□ -0.26
SLIT3-201ENST00000332966 KLHDC3Q9BQ90 382 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 AGFG2O95081 481 aa13.44□□□□□ -0.26
SLIT3-201ENST00000332966 IGHV3OR15-7A0A075B7D8 119 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 TMPRSS2O15393 492 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 GCSHP23434 173 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 SHISA5Q8N114 240 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 MYOZ3Q8TDC0 251 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 HSPB7Q9UBY9 170 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 PGPEP1LA6NFU8 196 aa13.43□□□□□ -0.26
SLIT3-201ENST00000332966 TIMP3P35625 211 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms