RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ATP6V1FQ16864 119 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 CHODLQ9H9P2 273 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
DDX41-201ENST00000330503 C22orf46C9J442 243 aa13.77□□□□□ -0.21
DDX41-201ENST00000330503 C9JQL5 133 aa13.77□□□□□ -0.21
DDX41-201ENST00000330503 TMEM177Q53S58 311 aa13.77□□□□□ -0.21
DDX41-201ENST00000330503 OR10P1Q8NGE3 313 aa13.77□□□□□ -0.21
DDX41-201ENST00000330503 TMEM170AQ8WVE7 144 aa13.77□□□□□ -0.21
DDX41-201ENST00000330503 TAF15Q92804 592 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX41-201ENST00000330503 UQCC1Q9NVA1 299 aa13.77□□□□□ -0.21
DDX41-201ENST00000330503 A6NNC1 897 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 LY86O95711 162 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 APOA2P02652 100 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 APOC3P02656 99 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 ADCYAP1P18509 176 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 SPSB3Q6PJ21 355 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 PSMG3Q9BT73 122 aaPredicted RBP13.76□□□□□ -0.21
DDX41-201ENST00000330503 TMEM147Q9BVK8 224 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 PATZ1Q9HBE1 687 aaKnown RBP13.76□□□□□ -0.21
DDX41-201ENST00000330503 HEYLQ9NQ87 328 aaPredicted RBP13.76□□□□□ -0.21
DDX41-201ENST00000330503 USP24Q9UPU5 2620 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 IGHV2-26A0A0B4J1V2 119 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 H7C2Y5 167 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 IGLV1-47P01700 117 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 CCL20P78556 96 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 VWC2Q2TAL6 325 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 C10orf91Q5T1B1 145 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 AKR1C8PQ5T2L2 129 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 PUSL1Q8N0Z8 303 aaKnown RBP13.76□□□□□ -0.21
DDX41-201ENST00000330503 COMMD1Q8N668 190 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 OSR1Q8TAX0 266 aaPredicted RBP13.76□□□□□ -0.21
DDX41-201ENST00000330503 LHX4Q969G2 390 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 VSIRQ9H7M9 311 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 OR51B2Q9Y5P1 312 aa13.76□□□□□ -0.21
DDX41-201ENST00000330503 RRHO14718 337 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 RBP4P02753 201 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 SAA1P0DJI8 122 aaPredicted RBP13.75□□□□□ -0.21
DDX41-201ENST00000330503 MDKP21741 143 aaPredicted RBP13.75□□□□□ -0.21
DDX41-201ENST00000330503 ATRAIDQ6UW56 229 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
DDX41-201ENST00000330503 HIPK2Q9H2X6 1198 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 PRNDQ9UKY0 176 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 A0A1B0GV50 99 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 A0A1W2PPH5 198 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 FAM157AC9JC47 383 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 IFNA10P01566 189 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 DVL1P1P54792 670 aaPredicted RBP13.75□□□□□ -0.21
DDX41-201ENST00000330503 CENPVQ7Z7K6 275 aaPredicted RBP13.75□□□□□ -0.21
DDX41-201ENST00000330503 TGIF2LXQ8IUE1 241 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 Q8N7P7 452 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 TNFRSF14Q92956 283 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 PCGF1Q9BSM1 259 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 RPRMQ9NS64 109 aa13.75□□□□□ -0.21
DDX41-201ENST00000330503 KBTBD11O94819 623 aa13.74□□□□□ -0.21
DDX41-201ENST00000330503 DPPA3Q6W0C5 159 aa13.74□□□□□ -0.21
DDX41-201ENST00000330503 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
DDX41-201ENST00000330503 CLCC1Q96S66 551 aa13.74□□□□□ -0.21
DDX41-201ENST00000330503 AIFM2Q9BRQ8 373 aa13.74□□□□□ -0.21
DDX41-201ENST00000330503 CACNA1BQ00975 2339 aa13.74□□□□□ -0.21
DDX41-201ENST00000330503 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 PRSS46E5RG02 174 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 LIPFP07098 398 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 H2AFB1P0C5Y9 115 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 HOXA1P49639 335 aaPredicted RBP13.73□□□□□ -0.21
DDX41-201ENST00000330503 PRRX1P54821 245 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 RPP30P78346 268 aaKnown RBP13.73□□□□□ -0.21
DDX41-201ENST00000330503 HLA-DRB5Q30154 266 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 RITA1Q96K30 269 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 HARBI1Q96MB7 349 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 CLEC7AQ9BXN2 247 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 IGLV2-23P01705 113 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 SERF2P84101 59 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 GUK1Q16774 197 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 BBC3Q96PG8 261 aaPredicted RBP13.73□□□□□ -0.21
DDX41-201ENST00000330503 ONECUT1Q9UBC0 465 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 ZNF257Q9Y2Q1 563 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 WASHC3Q9Y3C0 194 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 TIMM9Q9Y5J7 89 aa13.73□□□□□ -0.21
DDX41-201ENST00000330503 BUB1B-PAK6H3BSN5 160 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 PRB1P04280 392 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 IL3RAP26951 378 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 EFNA4P52798 201 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 DEFA5Q01523 94 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 HNF4GQ14541 408 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 ETV3LQ6ZN32 361 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 BEND2Q8NDZ0 799 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 OR4C13Q8NGP0 309 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 TNCP24821 2201 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 ARHGAP32A7KAX9 2087 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 LOC105371242A0A075B767 164 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 F8W036 122 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 RNF224P0DH78 156 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 FGF7P21781 194 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 COX7A1P24310 79 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 GPR6P46095 362 aaPredicted RBP13.72□□□□□ -0.21
DDX41-201ENST00000330503 PRCDQ00LT1 54 aa13.72□□□□□ -0.21
DDX41-201ENST00000330503 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms