RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 UBE2L5PA0A1B0GUS4 154 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 SRRM4A7MD48 611 aaKnown RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 UPK2O00526 184 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 SCO1O75880 301 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 RPP30P78346 268 aaKnown RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 TMEM177Q53S58 311 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 PSMG3Q9BT73 122 aaPredicted RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 NARFLQ9H6Q4 476 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 PATZ1Q9HBE1 687 aaKnown RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 PRNDQ9UKY0 176 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 IGHV2-26A0A0B4J1V2 119 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 APOC3P02656 99 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 SNCAP37840 140 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 PRRX1P54821 245 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 PDPNQ86YL7 162 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 TGIF2LXQ8IUE1 241 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 LY6G5BQ8NDX9 201 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
TPM3-205ENST00000328159 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 BET1LQ9NYM9 111 aa12.14□□□□□ -0.47
TPM3-205ENST00000328159 CACNA1BQ00975 2339 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 C22orf46C9J442 243 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 RNASEK-C17orf49H0YIS7 233 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 IFNA10P01566 189 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 LIPFP07098 398 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 SAA1P0DJI8 122 aaPredicted RBP12.13□□□□□ -0.47
TPM3-205ENST00000328159 PUSL1Q8N0Z8 303 aaKnown RBP12.13□□□□□ -0.47
TPM3-205ENST00000328159 LHX4Q969G2 390 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
TPM3-205ENST00000328159 HARBI1Q96MB7 349 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 PCGF1Q9BSM1 259 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 CLEC7AQ9BXN2 247 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 OR51B2Q9Y5P1 312 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 A0A1W2PPE2 198 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 A0A1W2PR64 198 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 KBTBD11O94819 623 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 F12P00748 615 aaPredicted RBP12.13□□□□□ -0.47
TPM3-205ENST00000328159 IGLV1-47P01700 117 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 CD5P06127 495 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
TPM3-205ENST00000328159 DLX1P56177 255 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 VWC2Q2TAL6 325 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 ONECUT1Q9UBC0 465 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 ZNF257Q9Y2Q1 563 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 WASHC3Q9Y3C0 194 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 TIMM9Q9Y5J7 89 aa12.13□□□□□ -0.47
TPM3-205ENST00000328159 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 NDUFS7O75251 213 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 H2AFB1P0C5Y9 115 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 MYOD1P15172 320 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
TPM3-205ENST00000328159 SERF2P84101 59 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 BEND2Q8NDZ0 799 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 SSBP3Q9BWW4 388 aaPredicted RBP12.12□□□□□ -0.47
TPM3-205ENST00000328159 ENY2Q9NPA8 101 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 CFAP46Q8IYW2 2715 aa12.12□□□□□ -0.47
TPM3-205ENST00000328159 A0A1B0GV50 99 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 RRHO14718 337 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 ADCYAP1P18509 176 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 COX7A1P24310 79 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 MC5RP33032 325 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 RAB13P51153 203 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 EFNA4P52798 201 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
TPM3-205ENST00000328159 TLE4Q04727 773 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 SPSB3Q6PJ21 355 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 ETV3LQ6ZN32 361 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 MS4A7Q9GZW8 240 aaPredicted RBP12.11□□□□□ -0.47
TPM3-205ENST00000328159 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
TPM3-205ENST00000328159 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 F8W036 122 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 FGF7P21781 194 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 DEFA5Q01523 94 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 GUK1Q16774 197 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 C10orf91Q5T1B1 145 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 CENPVQ7Z7K6 275 aaPredicted RBP12.1□□□□□ -0.47
TPM3-205ENST00000328159 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 SCRT1Q9BWW7 348 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 HINT2Q9BX68 163 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 RPRMQ9NS64 109 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 TNCP24821 2201 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 LRBAP50851 2863 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 BUB1B-PAK6H3BSN5 160 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
TPM3-205ENST00000328159 RAB11AP62491 216 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 Q8N7P7 452 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 VSIRQ9H7M9 311 aa12.1□□□□□ -0.47
TPM3-205ENST00000328159 CARHSP1Q9Y2V2 147 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms