RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 OR2H2O95918 312 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 CA6P23280 308 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 GNG3P63215 75 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 ARG2P78540 354 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 RHOGP84095 191 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 ZXDAP98168 799 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 PMCHL1Q16048 86 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 GCNT2Q8N0V5 402 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 BORCS7Q96B45 105 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 POM121L2Q96KW2 1035 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 PKIBQ9C010 78 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 OR5B21A6NL26 309 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 RBMXL2O75526 392 aaKnown RBP10.63□□□□□ -0.71
CCDC60-201ENST00000327554 NTF3P20783 257 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 SLC35B1P78383 322 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 ARF1P84077 181 aaKnown RBP10.63□□□□□ -0.71
CCDC60-201ENST00000327554 NRN1LQ496H8 165 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 COX19Q49B96 90 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 SPATA31B1PQ5VZV4 182 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 SLC25A45Q8N413 288 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 OR10D3Q8NH80 312 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 ABHD3Q8WU67 409 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 HCFC1P51610 2035 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 TET2Q6N021 2002 aaPredicted RBP10.63□□□□□ -0.71
CCDC60-201ENST00000327554 CEP192Q8TEP8 1941 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 A0A096LPE4 126 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 A0A1W2PPZ6 126 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 CDIPTO14735 213 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 IGLL1P15814 213 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 CATR1Q13166 79 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 MS4A5Q9H3V2 200 aa10.63□□□□□ -0.71
CCDC60-201ENST00000327554 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
CCDC60-201ENST00000327554 A0A0G2JMM0 328 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 A0A1W2PPB8 328 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 A0A1W2PRS3 328 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 KIR3DP1A8MWS1 328 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 PRSS46E5RG02 174 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 AMY1AP04745 511 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 PDLIM3Q53GG5 364 aaPredicted RBP10.62□□□□□ -0.71
CCDC60-201ENST00000327554 CENPWQ5EE01 88 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 C9orf135Q5VTT2 229 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 MRPL14Q6P1L8 145 aaKnown RBP10.62□□□□□ -0.71
CCDC60-201ENST00000327554 RNASE7Q9H1E1 156 aaKnown RBP10.62□□□□□ -0.71
CCDC60-201ENST00000327554 H0YJW9 148 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 J3QT63 122 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 FOXH1O75593 365 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 HLA-DQA1P01909 254 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
CCDC60-201ENST00000327554 SSR4P51571 173 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 TCL1AP56279 114 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 LINC00205P59089 165 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 RPL19P84098 196 aaKnown RBP10.62□□□□□ -0.71
CCDC60-201ENST00000327554 FXYD3Q14802 87 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 VAMP3Q15836 100 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 SMIM15Q7Z3B0 74 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 C18orf32Q8TCD1 76 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 FAM122AQ96E09 287 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 C1orf159Q96HA4 380 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 RNF24Q9Y225 148 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 MPC1Q9Y5U8 109 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 WDR87Q6ZQQ6 2873 aa10.62□□□□□ -0.71
CCDC60-201ENST00000327554 CBY3A6NI87 242 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 ANKRD30BLA7E2S9 258 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 AREGP15514 252 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 SELENOVP59797 346 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
CCDC60-201ENST00000327554 TBR1Q16650 682 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 LRRC10Q5BKY1 277 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 MRPL54Q6P161 138 aaKnown RBP10.61□□□□□ -0.71
CCDC60-201ENST00000327554 EBLN2Q6P2I7 272 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 ERASQ7Z444 233 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 DOLPP1Q86YN1 238 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 NEUROG1Q92886 237 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 SEPSECSQ9HD40 501 aaKnown RBP10.61□□□□□ -0.71
CCDC60-201ENST00000327554 OSTCQ9NRP0 149 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 KCNIP1Q9NZI2 227 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 RARRES3Q9UL19 164 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 LOC102723996A0A087X1L8 192 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 IGHV1-45A0A0A0MS14 117 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 LINC00473A8K010 186 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 OR9G9P0C7N8 305 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 RAC2P15153 192 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 VEGFBP49765 207 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 GNG4P50150 75 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 FOXG1P55316 489 aaPredicted RBP10.61□□□□□ -0.71
CCDC60-201ENST00000327554 RELBQ01201 579 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 EFNB3Q15768 340 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 OCIAD2Q56VL3 154 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 LDLRAD2Q5SZI1 272 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 OR52L2PQ8NGH6 319 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 IMMP1LQ96LU5 166 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 VPS25Q9BRG1 176 aa10.61□□□□□ -0.71
CCDC60-201ENST00000327554 ZNF891A8MT65 544 aaPredicted RBP10.6□□□□□ -0.71
CCDC60-201ENST00000327554 TMPRSS3P57727 454 aa10.6□□□□□ -0.71
CCDC60-201ENST00000327554 PQLC2Q6ZP29 291 aa10.6□□□□□ -0.71
CCDC60-201ENST00000327554 TSTD1Q8NFU3 115 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms