RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 HOXB4P17483 251 aaPredicted RBP15.21■□□□□ 0.03
EXOSC3-201ENST00000327304 TNFRSF9Q07011 255 aa15.21■□□□□ 0.03
EXOSC3-201ENST00000327304 CLEC9AQ6UXN8 241 aa15.21■□□□□ 0.03
EXOSC3-201ENST00000327304 TMED6Q8WW62 240 aa15.21■□□□□ 0.03
EXOSC3-201ENST00000327304 CXorf58Q96LI9 332 aa15.21■□□□□ 0.03
EXOSC3-201ENST00000327304 WFDC1Q9HC57 220 aa15.21■□□□□ 0.03
EXOSC3-201ENST00000327304 RNASEK-C17orf49H0YIS7 233 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 TXNL1O43396 289 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 UBE2KP61086 200 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 ZNF266Q14584 549 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 OR13D1Q8NGV5 346 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 ABCA1O95477 2261 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 NQO2P16083 231 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 AARDQ4LEZ3 155 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 FAM71F2Q6NXP2 309 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 ZNF833PQ6ZTB9 187 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 STX12Q86Y82 276 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 GINS3Q9BRX5 216 aa15.2■□□□□ 0.02
EXOSC3-201ENST00000327304 IGLV1-47P01700 117 aa15.19■□□□□ 0.02
EXOSC3-201ENST00000327304 ERVK-16P61578 105 aa15.19■□□□□ 0.02
EXOSC3-201ENST00000327304 OR11H6Q8NGC7 330 aa15.19■□□□□ 0.02
EXOSC3-201ENST00000327304 LHX4Q969G2 390 aa15.19■□□□□ 0.02
EXOSC3-201ENST00000327304 C7orf69Q9H7B7 122 aa15.19■□□□□ 0.02
EXOSC3-201ENST00000327304 PSENENQ9NZ42 101 aa15.19■□□□□ 0.02
EXOSC3-201ENST00000327304 CACFD1Q9UGQ2 172 aa15.19■□□□□ 0.02
EXOSC3-201ENST00000327304 TEX15Q9BXT5 2789 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 A0A1W2PRD5 423 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 A0A1W2PRF3 423 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 A0A1W2PRM7 423 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 SEC11BP0C7V7 166 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 FAM157CP0CG43 387 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 GATA3P23771 443 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 SULT1A1P50225 295 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 CYB5R2Q6BCY4 276 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 ZNF383Q8NA42 475 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 OR10X1Q8NGY0 326 aa15.18■□□□□ 0.02
EXOSC3-201ENST00000327304 ODF3BA8MYP8 253 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 TAGLNQ01995 201 aaKnown RBP15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 HLA-DRB5Q30154 266 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 DHRS7BQ6IAN0 325 aaPredicted RBP15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 BEND2Q8NDZ0 799 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 OR4P4Q8NGL7 312 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 OR5C1Q8NGR4 320 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 RBKSQ9H477 322 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 ACANP16112 2415 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 CSPG4Q6UVK1 2322 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 CST7O76096 145 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 LY86O95711 162 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 AVPP01185 164 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 ARG1P05089 322 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 CT45A6P0DMU7 189 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 CT45A5P0DMU8 189 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 CT45A7P0DMV0 189 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 IAPPP10997 89 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 SULT1A2P50226 295 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 PRRX1P54821 245 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 POU2AF1Q16633 256 aa15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 SAT2Q96F10 170 aaPredicted RBP15.17■□□□□ 0.02
EXOSC3-201ENST00000327304 MFSD2BA6NFX1 497 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 SPP1P10451 314 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 DYNLT3P51808 116 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 ZNF137PP52743 207 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 AANATQ16613 207 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 LDLRAD2Q5SZI1 272 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 HSD17B13Q7Z5P4 300 aaPredicted RBP15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 STPG2Q8N412 459 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 EIF4E3Q8N5X7 224 aaKnown RBP15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 OR1S2Q8NGQ3 325 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 CIB3Q96Q77 187 aaPredicted RBP15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 CELSR1Q9NYQ6 3014 aa15.16■□□□□ 0.02
EXOSC3-201ENST00000327304 DFFBO76075 338 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 CRYZL1O95825 349 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 OR9G9P0C7N8 305 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 DIAPH2-AS1Q14236 149 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 RTL8BQ17RB0 113 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 OR52E5Q8NH55 327 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 TLN2Q9Y4G6 2542 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 IGHV3OR16-10A0A075B7F0 116 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 CENPVL3A0A0U1RRI6 287 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 H3BP45 60 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 BUB1B-PAK6H3BSN5 160 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 J3QLI3 93 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 FBXO24O75426 580 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 RBMXL2O75526 392 aaKnown RBP15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 HRASP01112 189 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 UBE2E1P51965 193 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 KRTAP1-1Q07627 177 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 CLINT1Q14677 625 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 PDLIM3Q53GG5 364 aaPredicted RBP15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 OR4A16Q8NH70 328 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 ST6GALNAC6Q969X2 333 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 ATP5SQ99766 215 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 AIFM2Q9BRQ8 373 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 SLC35D1Q9NTN3 355 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 TMEM140Q9NV12 185 aa15.15■□□□□ 0.02
EXOSC3-201ENST00000327304 SVEP1Q4LDE5 3571 aa15.14■□□□□ 0.01
EXOSC3-201ENST00000327304 TRAV40A0A0B4J280 105 aa15.14■□□□□ 0.01
EXOSC3-201ENST00000327304 REG1BP48304 166 aa15.14■□□□□ 0.01
EXOSC3-201ENST00000327304 TMEM14EPQ6UXP3 125 aa15.14■□□□□ 0.01
EXOSC3-201ENST00000327304 LHFPL4Q7Z7J7 247 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms