RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 LOXL3P58215 753 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 MZT1Q08AG7 82 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 FAM209BQ5JX69 171 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 CALYQ9NYX4 217 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 ATMQ13315 3056 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 ADGRG4Q8IZF6 3080 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 IGHV2-70P01814 119 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 MS4A5Q9H3V2 200 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 PTPRBP23467 1997 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 NDUFB4O95168 129 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 PFN1P07737 140 aaKnown RBP14.4□□□□□ -0.1
COL9A1-201ENST00000320755 FAM3BP58499 235 aaPredicted RBP14.4□□□□□ -0.1
COL9A1-201ENST00000320755 SPCS3P61009 180 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 TRAT1Q6PIZ9 186 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 TMEM37Q8WXS4 190 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 IFI27L2Q9H2X8 130 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 JPT1Q9UK76 154 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 WDR83OSQ9Y284 106 aa14.4□□□□□ -0.1
COL9A1-201ENST00000320755 PPP5D1E7EU14 171 aa14.39□□□□□ -0.11
COL9A1-201ENST00000320755 LYG1Q8N1E2 194 aa14.39□□□□□ -0.11
COL9A1-201ENST00000320755 ZNF292O60281 2723 aa14.39□□□□□ -0.11
COL9A1-201ENST00000320755 TREML4Q6UXN2 200 aa14.39□□□□□ -0.11
COL9A1-201ENST00000320755 TGIF2LYQ8IUE0 185 aa14.39□□□□□ -0.11
COL9A1-201ENST00000320755 Q8N7P7 452 aa14.39□□□□□ -0.11
COL9A1-201ENST00000320755 ZGRF1Q86YA3 2104 aa14.39□□□□□ -0.11
COL9A1-201ENST00000320755 YPEL1O60688 119 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 VWC2Q2TAL6 325 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 C22orf34Q6ZV56 151 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 RHOVQ96L33 236 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 YPEL2Q96QA6 119 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 TUBG2Q9NRH3 451 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 ZNRD1Q9P1U0 126 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 RELBQ01201 579 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 FAM27E3Q08E93 113 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 CT45A1Q5HYN5 189 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 FAM90A1Q86YD7 464 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 CT45A3Q8NHU0 189 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 SNRNP40Q96DI7 357 aaKnown RBP14.38□□□□□ -0.11
COL9A1-201ENST00000320755 PFDN5Q99471 154 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 TCF19Q9Y242 345 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 CCL13Q99616 98 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 DCAF16Q9NXF7 216 aa14.38□□□□□ -0.11
COL9A1-201ENST00000320755 A0A0U1RQK1 487 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 GFRA3O60609 400 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 ARL14EPLP0DKL9 152 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 GNB1P62873 340 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 PXMP4Q9Y6I8 212 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 SAA2-SAA4A0A096LPE2 208 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 LY86O95711 162 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 SAA2P0DJI9 122 aaPredicted RBP14.37□□□□□ -0.11
COL9A1-201ENST00000320755 PMS2P11Q13670 270 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 PRSS8Q16651 343 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 TMEM170AQ8WVE7 144 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 PACRGQ96M98 296 aaPredicted RBP14.37□□□□□ -0.11
COL9A1-201ENST00000320755 MGST2Q99735 147 aa14.37□□□□□ -0.11
COL9A1-201ENST00000320755 K7EM74 188 aa14.36□□□□□ -0.11
COL9A1-201ENST00000320755 RPP30P78346 268 aaKnown RBP14.36□□□□□ -0.11
COL9A1-201ENST00000320755 SRD5A3Q9H8P0 318 aa14.36□□□□□ -0.11
COL9A1-201ENST00000320755 GFOD1Q9NXC2 390 aa14.36□□□□□ -0.11
COL9A1-201ENST00000320755 FUT9Q9Y231 359 aa14.36□□□□□ -0.11
COL9A1-201ENST00000320755 FAM215AQ9Y5M1 114 aa14.36□□□□□ -0.11
COL9A1-201ENST00000320755 ZCCHC24Q8N2G6 241 aaKnown RBP14.36□□□□□ -0.11
COL9A1-201ENST00000320755 FAM122AQ96E09 287 aa14.36□□□□□ -0.11
COL9A1-201ENST00000320755 ELOA3CA0A087WX78 387 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 MBD3L4A6NDZ8 208 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 MBD3L3A6NE82 208 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 MBD3L5A6NJ08 208 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 PHOX2AO14813 284 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 VDAC2P45880 294 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 C17orf58Q2M2W7 97 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 FAM78BQ5VT40 261 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 FAM216BQ8N7L0 139 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 MBD3L2Q8NHZ7 208 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 HRASP01112 189 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 GLRXP35754 106 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 MRPS11P82912 194 aaKnown RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 GAMTQ14353 236 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 TIMM23BQ5SRD1 257 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 ZNF114Q8NC26 417 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 OR2T10Q8NGZ9 312 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 HIST1H2BLQ99880 126 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 APC2O95996 2303 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 XKRY2A2RUG3 117 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 MMP23AO75900 390 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 TNFAIP6P98066 277 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-201ENST00000320755 OR4A47Q6IF82 309 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 OR4S2Q8NH73 311 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 GGTLC1Q9BX51 225 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 PRO1933Q9H354 126 aa14.35□□□□□ -0.11
COL9A1-201ENST00000320755 F2RL2O00254 374 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 ACTL6BO94805 426 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 SPATA31B1PQ5VZV4 182 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 PITPNC1Q9UKF7 332 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 CCL8P80075 99 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 GCM1Q9NP62 436 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 ENY2Q9NPA8 101 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 SH3BGRL2Q9UJC5 107 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 DMRT1Q9Y5R6 373 aa14.34□□□□□ -0.11
COL9A1-201ENST00000320755 TRGV10A0A0A0MS01 117 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms