RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 FLI1Q01543 452 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 TCTEX1D1Q8N7M0 179 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 NECAP1Q8NC96 275 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 COQ2Q96H96 371 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 RASL11BQ9BPW5 248 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 SEBOXQ9HB31 216 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF835Q9Y2P0 537 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF462Q96JM2 2506 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 IGKV1D-17A0A075B6S4 117 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 IGSF23A1L1A6 192 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LY86O95711 162 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LIPFP07098 398 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LINC00205P59089 165 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 RPL8P62917 257 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 MORN2Q502X0 79 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 HSD17B13Q7Z5P4 300 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LSM10Q969L4 123 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 QTRT1Q9BXR0 403 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 BARX1Q9HBU1 254 aaPredicted RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 TCF19Q9Y242 345 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 WASHC3Q9Y3C0 194 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 DOCK11Q5JSL3 2073 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 BPTFQ12830 3046 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 SMAD7O15105 426 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 ZP3P21754 424 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LCN2P80188 198 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 HERPUD1Q15011 391 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LHFPL5Q8TAF8 219 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 GPR61Q9BZJ8 451 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 DBX1A6NMT0 343 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 HTR1DP28221 377 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 RPL35P42766 123 aaKnown RBP7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 LGALS7P47929 136 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 PERPQ96FX8 193 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 CLEC7AQ9BXN2 247 aa7.75□□□□□ -1.17
TMEM39A-201ENST00000319172 XIRP2A4UGR9 3374 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF785A8K8V0 405 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 E7EQL1 145 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 MT-ND4LP03901 98 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 HLA-GP17693 338 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 CD1BP29016 333 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 FAM78BQ5VT40 261 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 FAM53AQ6NSI3 398 aaPredicted RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 LINC00312Q9Y6C7 94 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 TMEM218A2RU14 115 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 RAB19A4D1S5 217 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF737O75373 536 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 REG1AP05451 166 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 MC5RP33032 325 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 RPL27AP46776 148 aaKnown RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF672Q499Z4 452 aaPredicted RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 SEM1Q6ZVN7 128 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 COA4Q9NYJ1 87 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 METTL1Q9UBP6 276 aaKnown RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 SAA2-SAA4A0A096LPE2 208 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 H7BYZ3 331 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 IGLV1-44P01699 117 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 ACAA1P09110 424 aaPredicted RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 SAA2P0DJI9 122 aaPredicted RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 C1orf122Q6ZSJ8 110 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 COMMD1Q8N668 190 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 FAM169BQ8N8A8 192 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 MRPL20Q9BYC9 149 aaKnown RBP7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 TMEM56-RWDD3S4R434 201 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 JMJD1CQ15652 2540 aa7.74□□□□□ -1.17
TMEM39A-201ENST00000319172 IGKV1-6A0A0C4DH72 117 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 RBFOX3A6NFN3 312 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 OR2C1O95371 312 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 SULT1A2P50226 295 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 SAPCD1Q5SSQ6 148 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 ZFP82Q8N141 532 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 CITED2Q99967 270 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 FGF23Q9GZV9 251 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 SLC35B3Q9H1N7 401 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 LIME1Q9H400 295 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 BIN3Q9NQY0 253 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 CBLN4Q9NTU7 201 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 HIVEP3Q5T1R4 2406 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 CEACAM18A8MTB9 384 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 KBTBD11O94819 623 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 MMP9P14780 707 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF429Q86V71 674 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 OR4C13Q8NGP0 309 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 TMEM186Q96B77 213 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 C18orf12Q96KH6 178 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 CCL19Q99731 98 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 GRNP28799 593 aaKnown RBP7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 EML5Q05BV3 1969 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 ECSCRQ19T08 205 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 TVP23CQ96ET8 276 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 BSCL2Q96G97 398 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 TUBD1Q9UJT1 453 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 TMEM178BH3BS89 294 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 YPEL1O60688 119 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 LYZP61626 148 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 RHOBP62745 196 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 RPL30P62888 115 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms