RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 TMEM183AQ8IXX5 376 aa12.12□□□□□ -0.47
RAPH1-202ENST00000319170 SMRP1Q8NCR6 262 aa12.12□□□□□ -0.47
RAPH1-202ENST00000319170 FOXS1O43638 330 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 GPR146Q96CH1 333 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 C9JCJ5 164 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 DNASE2BQ8WZ79 361 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
RAPH1-202ENST00000319170 RNASE4P34096 147 aaKnown RBP12.11□□□□□ -0.47
RAPH1-202ENST00000319170 GLIPR1P48060 266 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 CD69Q07108 199 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 TBL2Q9Y4P3 447 aaKnown RBP12.11□□□□□ -0.47
RAPH1-202ENST00000319170 P2RY4P51582 365 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 UCNP55089 124 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 STARD6P59095 220 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 LCN2P80188 198 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 A1L4Q6 167 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 AHRRA9YTQ3 701 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 B4E171 279 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 FCARP24071 287 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 MOSP00540 346 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 ZNF818PQ6ZRF7 136 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 LDLRAD4O15165 306 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 LRRK1Q38SD2 2015 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 NPPCP23582 126 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 CTSSP25774 331 aa12.11□□□□□ -0.47
RAPH1-202ENST00000319170 TSPAN7P41732 249 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 JKAMPQ9P055 326 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
RAPH1-202ENST00000319170 NDUFA3O95167 84 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 ZNF660Q6AZW8 331 aaPredicted RBP12.1□□□□□ -0.47
RAPH1-202ENST00000319170 NPIPB11E5RHQ5 1161 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 CD1AP06126 327 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 PLSCR2Q9NRY7 297 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 DLL3Q9NYJ7 618 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 RNF115Q9Y4L5 304 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 FGF5P12034 268 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 ACSF3Q4G176 576 aaPredicted RBP12.1□□□□□ -0.47
RAPH1-202ENST00000319170 SRXN1Q9BYN0 137 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 ZIC3O60481 467 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 MRPS18AQ9NVS2 196 aaKnown RBP12.1□□□□□ -0.47
RAPH1-202ENST00000319170 PRELID3AQ96N28 172 aa12.1□□□□□ -0.47
RAPH1-202ENST00000319170 ALX4Q9H161 411 aaPredicted RBP12.1□□□□□ -0.47
RAPH1-202ENST00000319170 TRAV8-6A0A0B4J262 113 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 CBLN1P23435 193 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 FOXJ2Q9P0K8 574 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 PDLIM4P50479 330 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 MTURNQ8N3F0 131 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 SSBP3Q9BWW4 388 aaPredicted RBP12.09□□□□□ -0.47
RAPH1-202ENST00000319170 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 TRBV5-5A0A0J9YX44 114 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 STAG3L3P0CL85 134 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 KLF14Q8TD94 323 aaPredicted RBP12.09□□□□□ -0.47
RAPH1-202ENST00000319170 FGF11Q92914 225 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 DUX3Q96PT4 197 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 CFDP00746 253 aaPredicted RBP12.09□□□□□ -0.47
RAPH1-202ENST00000319170 TGFAP01135 160 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 FTH1P19P0C7X4 201 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 FAM90A26D6RGX4 464 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 PNKDQ8N490 385 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 RND3P61587 244 aa12.09□□□□□ -0.47
RAPH1-202ENST00000319170 IGKV1-8A0A0C4DH67 115 aa12.08□□□□□ -0.47
RAPH1-202ENST00000319170 C1QCP02747 245 aa12.08□□□□□ -0.47
RAPH1-202ENST00000319170 LIMS1P48059 325 aa12.08□□□□□ -0.47
RAPH1-202ENST00000319170 GZMMP51124 257 aa12.08□□□□□ -0.47
RAPH1-202ENST00000319170 C19orf24Q9BVV8 132 aa12.08□□□□□ -0.47
RAPH1-202ENST00000319170 SLC25A47Q6Q0C1 308 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 WDR82Q6UXN9 313 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 OR5A1Q8NGJ0 315 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 FAM206AQ9NX38 181 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 STPG1Q5TH74 334 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 ZNF501Q96CX3 271 aaPredicted RBP12.08□□□□□ -0.48
RAPH1-202ENST00000319170 TMEM95Q3KNT9 176 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 GGACTQ9BVM4 153 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 CTAG1AP78358 180 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 WNT10AQ9GZT5 417 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 NDUFA2O43678 99 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 NGFRP08138 427 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 MEF2CQ06413 473 aaPredicted RBP12.08□□□□□ -0.48
RAPH1-202ENST00000319170 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.48
RAPH1-202ENST00000319170 PEF1Q9UBV8 284 aaKnown RBP12.08□□□□□ -0.48
RAPH1-202ENST00000319170 TRBV5-3A0A0A0MS03 114 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 M0R381 172 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 DANCRP0C864 163 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 SAXO1Q8IYX7 474 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
RAPH1-202ENST00000319170 H3BRM9 83 aa12.07□□□□□ -0.48
RAPH1-202ENST00000319170 SYNGR3O43761 229 aa12.07□□□□□ -0.48
RAPH1-202ENST00000319170 PAPPA-AS1Q5QFB9 102 aa12.07□□□□□ -0.48
RAPH1-202ENST00000319170 ITLN2Q8WWU7 325 aaPredicted RBP12.07□□□□□ -0.48
RAPH1-202ENST00000319170 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
RAPH1-202ENST00000319170 IGHV3-49A0A0A0MS15 119 aa12.07□□□□□ -0.48
RAPH1-202ENST00000319170 GCHFRP30047 84 aa12.07□□□□□ -0.48
RAPH1-202ENST00000319170 HSPE1P61604 102 aaKnown RBP12.07□□□□□ -0.48
RAPH1-202ENST00000319170 KCNK17Q96T54 332 aa12.07□□□□□ -0.48
RAPH1-202ENST00000319170 PKIBQ9C010 78 aa12.07□□□□□ -0.48
RAPH1-202ENST00000319170 IGHV1-69-2A0A0G2JMI3 117 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms