RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TBC1D28Q2M2D7 210 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 ZNF114Q8NC26 417 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 OR10P1Q8NGE3 313 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 HSPB7Q9UBY9 170 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 TRAPPC2LQ9UL33 140 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 MBD3L4A6NDZ8 208 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 MBD3L3A6NE82 208 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 MBD3L5A6NJ08 208 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 RAMP3O60896 148 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 RHBDL1O75783 438 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 NDUFB4O95168 129 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 CDC34P49427 236 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 MBD3L2Q8NHZ7 208 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 FZR1Q9UM11 496 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 SIRPB1O00241 398 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 TMEM106BQ9NUM4 274 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 ELOVL5Q9NYP7 299 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 PMS2P5A8MQ11 134 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 ZG16O60844 167 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 SELEP16581 610 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 ZNF816Q0VGE8 651 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 BATFQ16520 125 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 ZNF474Q6S9Z5 364 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 ZDHHC16Q969W1 377 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 NBEAQ8NFP9 2946 aa14.31□□□□□ -0.12
SCAMP4-201ENST00000316097 SMPD2O60906 423 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 CD99P14209 185 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 C21orf62-AS1Q17RA5 79 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 SPINK9Q5DT21 86 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 Q6ZWC4 215 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 BTF3L4Q96K17 158 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 PATZ1Q9HBE1 687 aaKnown RBP14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 PAM16Q9Y3D7 125 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 RBFOX2O43251 390 aaKnown RBP eCLIP14.3□□□□□ -0.125e-7■■□□□ 13.9
SCAMP4-201ENST00000316097 HOXC12P31275 282 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 FOXL1Q12952 345 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 GCSAMLQ5JQS6 135 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 SLC25A40Q8TBP6 338 aa14.3□□□□□ -0.12
SCAMP4-201ENST00000316097 ODAMA1E959 279 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 TMPRSS2O15393 492 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 PDE6DO43924 150 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 HNF1AP20823 631 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 C1orf185Q5T7R7 199 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 SFRP2Q96HF1 295 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 ZGRF1Q86YA3 2104 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 TRAV38-1A0A0B4J264 116 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 MDFIC2A0A1B0GVS7 189 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 MSMO1Q15800 293 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 DTD1Q8TEA8 209 aa14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 SNRNP40Q96DI7 357 aaKnown RBP14.29□□□□□ -0.12
SCAMP4-201ENST00000316097 LRRC30A6NM36 301 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 ANKRD30BLA7E2S9 258 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 RNF212BA8MTL3 300 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 YPEL1O60688 119 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 MPV17P39210 176 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 GNG3P63215 75 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 HOXA4Q00056 320 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 TPTE2P1Q5T6R2 138 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 Q6P435 159 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 C22orf34Q6ZV56 151 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 YPEL2Q96QA6 119 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 DIRC2Q96SL1 478 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 MIEN1Q9BRT3 115 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 TP53TG3Q9ULZ0 132 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 ATRXP46100 2492 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 F6UZH7 168 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 CECR9P0C854 216 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 TPPP2P59282 170 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 MOB1BQ7L9L4 216 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 ZNF808Q8N4W9 903 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 C20orf144Q9BQM9 153 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 LPAR2Q9HBW0 351 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 ESPL1Q14674 2120 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 C17orf112F2Z3M2 114 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 RBMXL2O75526 392 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 CBLN1P23435 193 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 BRS3P32247 399 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 CDKN1AP38936 164 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 GAGE1Q13065 139 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 ARSJQ5FYB0 599 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 TEX43Q6ZNM6 134 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 BHLHA15Q7RTS1 189 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 DOLPP1Q86YN1 238 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 FAM57AQ8TBR7 257 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 HSPB9Q9BQS6 159 aa14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-201ENST00000316097 PCNX1Q96RV3 2341 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 KALRNO60229 2985 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 S1PR2O95136 353 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 IGKV3-15P01624 115 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 KITLGP21583 273 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 RPL30P62888 115 aaKnown RBP14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 PSG7Q13046 419 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 KRTCAP3Q53RY4 240 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 ZNF497Q6ZNH5 498 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 VN1R17PQ8TDU5 208 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 TMEM204Q9BSN7 226 aa14.27□□□□□ -0.12
SCAMP4-201ENST00000316097 TRBV20OR9-2A0A075B6H5 130 aa14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 OR2H2O95918 312 aa14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 FABP6P51161 128 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms