RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TCF23Q7RTU1 214 aa10.26□□□□□ -0.77
RNF4-201ENST00000314289 REC114Q7Z4M0 266 aa10.26□□□□□ -0.77
RNF4-201ENST00000314289 LILRB2Q8N423 598 aa10.26□□□□□ -0.77
RNF4-201ENST00000314289 SSX3Q99909 188 aa10.26□□□□□ -0.77
RNF4-201ENST00000314289 SIRT7Q9NRC8 400 aa10.26□□□□□ -0.77
RNF4-201ENST00000314289 ELOA3CA0A087WX78 387 aaPredicted RBP10.25□□□□□ -0.77
RNF4-201ENST00000314289 SMCO3A2RU48 225 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 DUTP33316 252 aaKnown RBP10.25□□□□□ -0.77
RNF4-201ENST00000314289 GATA4P43694 442 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 FGF8P55075 233 aaPredicted RBP10.25□□□□□ -0.77
RNF4-201ENST00000314289 PKIAP61925 76 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 HTD2P86397 168 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 TLE4Q04727 773 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 USF2Q15853 346 aaPredicted RBP10.25□□□□□ -0.77
RNF4-201ENST00000314289 PRAMEF5Q5TYX0 476 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 NUP37Q8NFH4 326 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 SPOCK3Q9BQ16 436 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 IFI27L2Q9H2X8 130 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 SAP30LQ9HAJ7 183 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 JKAMPQ9P055 326 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 LRRC30A6NM36 301 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 C3orf36Q3SXR2 165 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 CT45A1Q5HYN5 189 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 SLC35E3Q7Z769 313 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 LYG1Q8N1E2 194 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 CT45A3Q8NHU0 189 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 Q8TCH9 128 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 GNPNAT1Q96EK6 184 aaPredicted RBP10.25□□□□□ -0.77
RNF4-201ENST00000314289 ZNF665Q9H7R5 613 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 TRAV3A0A0B4J244 114 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 UBE2L5PA0A1B0GUS4 154 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 OR9G9P0C7N8 305 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 SLC25A6P12236 298 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
RNF4-201ENST00000314289 RBPJQ06330 500 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 BAXQ07812 192 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 R3HDM4Q96D70 268 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 HIST1H2BLQ99880 126 aa10.25□□□□□ -0.77
RNF4-201ENST00000314289 QTRT1Q9BXR0 403 aaKnown RBP10.25□□□□□ -0.77
RNF4-201ENST00000314289 TET2Q6N021 2002 aaPredicted RBP10.24□□□□□ -0.77
RNF4-201ENST00000314289 E7EQL1 145 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 LYNX1G3V0Z9 82 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 LYNX1P0DP58 116 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 MMP9P14780 707 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 ELLP55199 621 aaPredicted RBP10.24□□□□□ -0.77
RNF4-201ENST00000314289 NECAP1Q8NC96 275 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 OR4C12Q96R67 309 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 OR6C3Q9NZP0 311 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 MALRD1Q5VYJ5 2156 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
RNF4-201ENST00000314289 TRGV10A0A0A0MS01 117 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 CEBPZOSA8MTT3 80 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 FCN3O75636 299 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 IFNA5P01569 189 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 CCL3L1P16619 93 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 CLEC12BQ2HXU8 276 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 LYPD2Q6UXB3 125 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 HSD17B10Q99714 261 aaKnown RBP10.24□□□□□ -0.77
RNF4-201ENST00000314289 DYNLRB1Q9NP97 96 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.24□□□□□ -0.77
RNF4-201ENST00000314289 JPT1Q9UK76 154 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 PKD1L2Q7Z442 2459 aa10.24□□□□□ -0.77
RNF4-201ENST00000314289 SAA2-SAA4A0A096LPE2 208 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 KBTBD11-OT1A0A1B0GTJ5 212 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 LOC102723971A0A1B0GUV8 181 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 CCL21O00585 134 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 SAA2P0DJI9 122 aaPredicted RBP10.23□□□□□ -0.77
RNF4-201ENST00000314289 SSX2Q16385 188 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 ZNF788Q6ZQV5 615 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 ZNF525Q8N782 197 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 FAM222BQ8WU58 562 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 H1FXQ92522 213 aaKnown RBP10.23□□□□□ -0.77
RNF4-201ENST00000314289 PLXNB1O43157 2135 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.23□□□□□ -0.77
RNF4-201ENST00000314289 SHISA9B4DS77 424 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 CLDN34H7C241 214 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 HMGB3O15347 200 aaKnown RBP10.23□□□□□ -0.77
RNF4-201ENST00000314289 HBE1P02100 147 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 SNRPCP09234 159 aaKnown RBP10.23□□□□□ -0.77
RNF4-201ENST00000314289 WNT2P09544 360 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 C1QTNF9P0C862 333 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 DEFA4P12838 97 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 MSMO1Q15800 293 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 WDR25Q64LD2 544 aaPredicted RBP10.23□□□□□ -0.77
RNF4-201ENST00000314289 FAM90A2PQ658T7 463 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 OR13D1Q8NGV5 346 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 DTD1Q8TEA8 209 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 SDSLQ96GA7 329 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 GAB2Q9UQC2 676 aa10.23□□□□□ -0.77
RNF4-201ENST00000314289 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
RNF4-201ENST00000314289 YPEL1O60688 119 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 P0C879 139 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 MYOD1P15172 320 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 TNFRSF1AP19438 455 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 DLX1P56177 255 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 SLC38A11Q08AI6 406 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 LY6DQ14210 128 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 ZNF787Q6DD87 383 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms