RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 IFT46Q9NQC8 304 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 BET1LQ9NYM9 111 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 CD40LGP29965 261 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 HRH1P35367 487 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 KIR2DS2P43631 304 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 RORCP51449 518 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 KLF5Q13887 457 aaPredicted RBP11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 SPCS2Q15005 226 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 SPIN2AQ99865 258 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 SPIN2BQ9BPZ2 258 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 ZNF2Q9BSG1 426 aaPredicted RBP11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 MRPS26Q9BYN8 205 aaKnown RBP11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 MIXL1Q9H2W2 232 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 AKIP1Q9NQ31 210 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 A0A0G2JLM5 398 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 PGLYRP1O75594 196 aaPredicted RBP11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 S1PR2O95136 353 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 CRYGCP07315 174 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 AREGP15514 252 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 HLA-DMAP28067 261 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 TAS2R31P59538 309 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 TAS2R46P59540 309 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 ZNF585BQ52M93 769 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 SSX9Q7RTT3 188 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 SNX29P2Q8IUI4 249 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 PHB2Q99623 299 aa11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 RANGRFQ9HD47 186 aaPredicted RBP11.16□□□□□ -0.62
PPP1CA-201ENST00000312989 DNAH7Q8WXX0 4024 aa11.15□□□□□ -0.62
PPP1CA-201ENST00000312989 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 ANKRD34BA5PLL1 514 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 NPIPB5A8MRT5 1133 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 SAP30O75446 220 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 HPRT1P00492 218 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 IGLV1-51P01701 117 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 ZNF182P17025 639 aaPredicted RBP11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 MAS1LP35410 378 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 RPL27AP46776 148 aaKnown RBP11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 RHOGP84095 191 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 AADACL3Q5VUY0 350 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 OR5H2Q8NGV7 314 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 OR51H1Q8NH63 302 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 ABHD1Q96SE0 405 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 SLC2A9Q9NRM0 540 aa11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 PEF1Q9UBV8 284 aaKnown RBP11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.63
PPP1CA-201ENST00000312989 FAM223BA6NKX1 122 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 BMPR1BO00238 502 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 UPK2O00526 184 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 HRASP01112 189 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 RLN1P04808 185 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 SPNP16150 400 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 CTRB1P17538 263 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 HLA-GP17693 338 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 OR2B8PP59922 312 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 HERV-K104P61576 105 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 VAX1Q5SQQ9 334 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 CTRB2Q6GPI1 263 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 FAM223AQ8IWN6 122 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 OR4A5Q8NH83 315 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 PLEKHA2Q9HB19 425 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 KLK11Q9UBX7 282 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
PPP1CA-201ENST00000312989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 OR2J3O76001 311 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 FGF2P09038 288 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 NQO2P16083 231 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 ZP3P21754 424 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 RCVRNP35243 200 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 CATR1Q13166 79 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 EXOSC2Q13868 293 aaKnown RBP11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 ADAMTSL5Q6ZMM2 481 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 LHFPL1Q86WI0 220 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 FCAMRQ8WWV6 532 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 CCDC140Q96MF4 163 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 THAP7Q9BT49 309 aaPredicted RBP11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 RSRP1Q9BUV0 290 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 TMEM140Q9NV12 185 aa11.13□□□□□ -0.63
PPP1CA-201ENST00000312989 ACTL6BO94805 426 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 NDUFB8O95169 186 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 IGKV1-39P01597 117 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 IGKV1D-39P04432 117 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 F2RP25116 425 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 PSMB6P28072 239 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 MECP2P51608 486 aaKnown RBP11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms