RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 POC1AQ8NBT0 407 aa7□□□□□ -1.29
VPS41-202ENST00000310301 SPAG8Q99932 426 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 FNDC4Q9H6D8 234 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 ZNF430Q9H8G1 570 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 RABAC1Q9UI14 185 aa7□□□□□ -1.29
VPS41-202ENST00000310301 LCTP09848 1927 aa7□□□□□ -1.29
VPS41-202ENST00000310301 GNLYP22749 145 aa7□□□□□ -1.29
VPS41-202ENST00000310301 GPR6P46095 362 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 REG1BP48304 166 aa7□□□□□ -1.29
VPS41-202ENST00000310301 CIRBPQ14011 172 aaKnown RBP7□□□□□ -1.29
VPS41-202ENST00000310301 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 SDHCQ99643 169 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 SIGMAR1Q99720 223 aa7□□□□□ -1.29
VPS41-202ENST00000310301 TMUB1Q9BVT8 246 aa7□□□□□ -1.29
VPS41-202ENST00000310301 RTN4RQ9BZR6 473 aa7□□□□□ -1.29
VPS41-202ENST00000310301 A6NNC1 897 aa7□□□□□ -1.29
VPS41-202ENST00000310301 CD8AP01732 235 aa7□□□□□ -1.29
VPS41-202ENST00000310301 PDLIM4P50479 330 aa7□□□□□ -1.29
VPS41-202ENST00000310301 TMEM78Q5T7P6 136 aa7□□□□□ -1.29
VPS41-202ENST00000310301 ZNF645Q8N7E2 425 aa7□□□□□ -1.29
VPS41-202ENST00000310301 GPHA2Q96T91 129 aa7□□□□□ -1.29
VPS41-202ENST00000310301 IGLV3-12A0A075B6K2 115 aa7□□□□□ -1.29
VPS41-202ENST00000310301 ASAH2BP0C7U1 165 aa7□□□□□ -1.29
VPS41-202ENST00000310301 DLX6P56179 175 aa7□□□□□ -1.29
VPS41-202ENST00000310301 MBNL2Q5VZF2 373 aaKnown RBP7□□□□□ -1.29
VPS41-202ENST00000310301 TCF24Q7RTU0 167 aa7□□□□□ -1.29
VPS41-202ENST00000310301 SGK494Q96LW2 274 aa7□□□□□ -1.29
VPS41-202ENST00000310301 HILPDAQ9Y5L2 63 aa7□□□□□ -1.29
VPS41-202ENST00000310301 CGB1A6NKQ9 187 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 S1PR2O95136 353 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 FCGR2BP31994 310 aaPredicted RBP6.99□□□□□ -1.29
VPS41-202ENST00000310301 FOXA3P55318 350 aaPredicted RBP6.99□□□□□ -1.29
VPS41-202ENST00000310301 ROM1Q03395 351 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 C2orf68Q2NKX9 166 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 TMEM95Q3KNT9 176 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 RNFT1Q5M7Z0 435 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 TTC9CQ8N5M4 171 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 GALNT14Q96FL9 552 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 LOC102723996A0A087X1L8 192 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 CENPVL1A0A0U1RR11 272 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 ANOS1P23352 680 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 HBBP68871 147 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 SMAGPQ0VAQ4 97 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 LDLRAD2Q5SZI1 272 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 VCX2Q9H322 139 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 GPR35Q9HC97 309 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 SF3B6Q9Y3B4 125 aaKnown RBP6.99□□□□□ -1.29
VPS41-202ENST00000310301 DNAL4O96015 105 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 C3AR1Q16581 482 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 CENPWQ5EE01 88 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 FGFRL1Q8N441 504 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 PLSCR2Q9NRY7 297 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 TNFRSF19Q9NS68 423 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 OR11H12B2RN74 326 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 VENTXO95231 258 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 UNC119Q13432 240 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 OR11H1Q8NG94 326 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 OR11H2Q8NH07 326 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 NEUROG1Q92886 237 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 C18orf15Q96N68 181 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 RNF7Q9UBF6 113 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 UBE2L6O14933 153 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 ZNF708P17019 499 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 ID1P41134 155 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 FAM19A2Q8N3H0 131 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 IL36BQ9NZH7 164 aa6.99□□□□□ -1.29
VPS41-202ENST00000310301 PIEZO1Q92508 2521 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 SLC17A3O00476 420 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 CELA2AP08217 269 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 CSRP3P50461 194 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 RPS20P60866 119 aaKnown RBP6.98□□□□□ -1.29
VPS41-202ENST00000310301 LCN2P80188 198 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 TMEM187Q14656 261 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 BEND2Q8NDZ0 799 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 UCN2Q96RP3 112 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 A0A087WWC5 75 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 NPIPB6E9PJ23 425 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 UBE2CO00762 179 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 ZG16O60844 167 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 RAMP1O60894 148 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 SRP19P09132 144 aaKnown RBP6.98□□□□□ -1.29
VPS41-202ENST00000310301 C8orf88P0DMB2 117 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 OR5A1Q8NGJ0 315 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 IMMP1LQ96LU5 166 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 JMJD8Q96S16 334 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 TRAV8-2A0A0B4J237 113 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 WISP1O95388 367 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 PPP1R17O96001 155 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 TDGF1P13385 188 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 TPRX1Q8N7U7 411 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 SYT8Q8NBV8 401 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 NUDT11Q96G61 164 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 ZNF714Q96N38 554 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 TRBV5-7A0A0A0MS05 114 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 F2RL2O00254 374 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 ZIC3O60481 467 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 LIMS1P48059 325 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 ECSCRQ19T08 205 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms