RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 C1orf159Q96HA4 380 aa12.54□□□□□ -0.4
SPIRE1-201ENST00000309836 NCOR1P1Q9H4R4 102 aa12.54□□□□□ -0.4
SPIRE1-201ENST00000309836 GAB2Q9UQC2 676 aa12.54□□□□□ -0.4
SPIRE1-201ENST00000309836 CACNA1HO95180 2353 aa12.54□□□□□ -0.4
SPIRE1-201ENST00000309836 SPENQ96T58 3664 aaKnown RBP12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 GATA4P43694 442 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 ATP5G3P48201 142 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 GNB1P62873 340 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 OR4S2Q8NH73 311 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 RAB1CQ92928 201 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 GGTLC1Q9BX51 225 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 PATZ1Q9HBE1 687 aaKnown RBP12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 SAA2-SAA4A0A096LPE2 208 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 MPDU1O75352 247 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 SAA2P0DJI9 122 aaPredicted RBP12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 RAB7AP51149 207 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 TMPRSS3P57727 454 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 UBE2G2P60604 165 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 STUMQ69YW2 141 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 SDSLQ96GA7 329 aa12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 RAI1Q7Z5J4 1906 aaPredicted RBP12.53□□□□□ -0.4
SPIRE1-201ENST00000309836 TRGV8A0A0C4DH27 118 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 KBTBD11-OT1A0A1B0GTJ5 212 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 C15orf61A6NNL5 157 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 HRASP01112 189 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 MIC13Q5XKP0 118 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 C22orf34Q6ZV56 151 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 ZNF439Q8NDP4 499 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 GAFA1Q96PS6 74 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 RNF7Q9UBF6 113 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.41
SPIRE1-201ENST00000309836 DSCAMO60469 2012 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 K7EM74 188 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 VENTXO95231 258 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 IGHV1-46P01743 117 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 Q6ZS92 163 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 TGIF2LYQ8IUE0 185 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 ANAPC16Q96DE5 110 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 OR5B12Q96R08 314 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 PCGF1Q9BSM1 259 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 GCM1Q9NP62 436 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 DMRT1Q9Y5R6 373 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 DSCAML1Q8TD84 2053 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 SOX15O60248 233 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 MYOD1P15172 320 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 THBS3P49746 956 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 TNFAIP6P98066 277 aaPredicted RBP12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 CLEC12BQ2HXU8 276 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 OR4A47Q6IF82 309 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 KCNIP2Q9NS61 270 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 TMEM14BQ9NUH8 114 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 LSM4Q9Y4Z0 139 aaKnown RBP12.51□□□□□ -0.41
SPIRE1-201ENST00000309836 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 A0A1W2PPV4 95 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 PDE6DO43924 150 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 GGCTO75223 188 aaKnown RBP12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 ARL14EPLP0DKL9 152 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 FABP4P15090 132 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 MRPS11P82912 194 aaKnown RBP12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 ARSJQ5FYB0 599 aaPredicted RBP12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 CST9LP1Q5W188 147 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 DEFB108BQ8NET1 73 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 CCL13Q99616 98 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 ZFHX4Q86UP3 3567 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 CADP27708 2225 aa12.5□□□□□ -0.41
SPIRE1-201ENST00000309836 SVILO95425 2214 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 TRGV10A0A0A0MS01 117 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 MMP23AO75900 390 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 STAG3L2P0CL84 134 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 CEACAM8P31997 349 aaPredicted RBP12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 TIMP3P35625 211 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 FAM27E3Q08E93 113 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 LINC01551Q86U37 167 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 ZCCHC14Q8WYQ9 949 aaKnown RBP12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 RHOVQ96L33 236 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 SFXN3Q9BWM7 321 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 DCAF16Q9NXF7 216 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 PITPNC1Q9UKF7 332 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 TANC2Q9HCD6 1990 aa12.49□□□□□ -0.41
SPIRE1-201ENST00000309836 TRAV20A0A0B4J274 112 aa12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 F6UZH7 168 aa12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 TMPRSS2O15393 492 aa12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 NDUFB4O95168 129 aa12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 COL8A2P25067 703 aa12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 CHRNA7P36544 502 aa12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 SRP14P37108 136 aaKnown RBP12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 HSPE1P61604 102 aaKnown RBP12.48□□□□□ -0.41
SPIRE1-201ENST00000309836 LYG1Q8N1E2 194 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms