RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 FAM3BP58499 235 aaPredicted RBP9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 SRSF3P84103 164 aaKnown RBP9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 OR4P4Q8NGL7 312 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 OR10G8Q8NGN5 311 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 CLDND2Q8NHS1 167 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 IGHV1-18A0A0C4DH31 117 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 PTBP3O95758 552 aaKnown RBP9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 NTF4P34130 210 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 Q56UQ5 140 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 GLRX5Q86SX6 157 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 OR8B3Q8NGG8 313 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 OR8B2Q96RD0 313 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 C19orf24Q9BVV8 132 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 UBTD1Q9HAC8 227 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 PITPNC1Q9UKF7 332 aa9.16□□□□□ -0.94
PCDHGC4-201ENST00000306593 CD40P25942 277 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 RPEL1Q2QD12 228 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 OR10D4PQ8NGN7 298 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 NUP210LQ5VU65 1888 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 KBTBD11-OT1A0A1B0GTJ5 212 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 FBP1P09467 338 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 ZNF581Q9P0T4 197 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
PCDHGC4-201ENST00000306593 XKRY2A2RUG3 117 aa9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 F5H697 171 aa9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 KBTBD11O94819 623 aa9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 TIMP3P35625 211 aa9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 PSG5Q15238 335 aa9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 RBM14Q96PK6 669 aaKnown RBP9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 QTRT1Q9BXR0 403 aaKnown RBP9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 NPCDR1Q9BY65 106 aa9.15□□□□□ -0.95
PCDHGC4-201ENST00000306593 A0A1W2PPE3 182 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 FABP4P15090 132 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 MEF2CQ06413 473 aaPredicted RBP9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 GOLT1BQ9Y3E0 138 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 VENTXO95231 258 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 UBE2L3P68036 154 aaKnown RBP9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 IL15RAQ13261 267 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 LINC00518Q8N0U6 118 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 PRO3102Q9H379 93 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 CCL21O00585 134 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 IGKV3-15P01624 115 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 USF1P22415 310 aaPredicted RBP9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 ZNRF1Q8ND25 227 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 TMEM37Q8WXS4 190 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 TMEM186Q96B77 213 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 WASHC3Q9Y3C0 194 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 SRRM5B3KS81 715 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 TPPP2P59282 170 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 SELENOTP62341 195 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 RPL8P62917 257 aaKnown RBP9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 MISP3Q96FF7 219 aa9.14□□□□□ -0.95
PCDHGC4-201ENST00000306593 MBD3L4A6NDZ8 208 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 MBD3L3A6NE82 208 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 MBD3L5A6NJ08 208 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 FOSL1P15407 271 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 HERPUD1Q15011 391 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 ACSM6Q6P461 480 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 SSX7Q7RTT5 188 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 MBD3L2Q8NHZ7 208 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 METTL1Q9UBP6 276 aaKnown RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 PTPN13Q12923 2485 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 DLL1O00548 723 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 ARFGEF3Q5TH69 2177 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 CCKARP32238 428 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 TNXAQ16473 311 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 NCMAPQ5T1S8 102 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 OSR1Q8TAX0 266 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 TMEM171Q8WVE6 324 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 STARD4Q96DR4 205 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 PARD6GQ9BYG4 376 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 MBNL3Q9NUK0 354 aaKnown RBP9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 ZNF586Q9NXT0 402 aa9.13□□□□□ -0.95
PCDHGC4-201ENST00000306593 LILRA1O75019 489 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 MORN2Q502X0 79 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 ZNF880Q6PDB4 577 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 ZNF596Q8TC21 504 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 INSIG2Q9Y5U4 225 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 MYO7BQ6PIF6 2116 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 CORTO00230 105 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 FOLR2P14207 255 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 ICAM4Q14773 271 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 RNFT1Q5M7Z0 435 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 C10orf113Q5VZT2 155 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 CYP2G1PQ6ZSU1 146 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 SLC25A15Q9Y619 301 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 HELTA6NFD8 242 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 TMPRSS3P57727 454 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 SIGLECL1Q8N7X8 197 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 OR52E5Q8NH55 327 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 PERPQ96FX8 193 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 CHODLQ9H9P2 273 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 LINC00312Q9Y6C7 94 aa9.12□□□□□ -0.95
PCDHGC4-201ENST00000306593 COMPP49747 757 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms