RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TTC9CQ8N5M4 171 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 OR4A5Q8NH83 315 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 CD300LFQ8TDQ1 290 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 ELOVL1Q9BW60 279 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 MRPS26Q9BYN8 205 aaKnown RBP20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 LY86O95711 162 aa20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 TAS2R31P59538 309 aa20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 CTF1Q16619 201 aa20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 OR6Q1Q8NGQ2 317 aa20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 MOB3AQ96BX8 217 aa20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 OR4C12Q96R67 309 aa20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 SCPEP1Q9HB40 452 aa20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 PEF1Q9UBV8 284 aaKnown RBP20.32■□□□□ 0.84
CDKN2A-201ENST00000304494 HPRT1P00492 218 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 GNRHRP30968 328 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 RPL27AP46776 148 aaKnown RBP20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 DEFA5Q01523 94 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 AADACL3Q5VUY0 350 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 SSX9Q7RTT3 188 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 OR6F1Q8NGZ6 308 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 GPX8Q8TED1 209 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 BET1LQ9NYM9 111 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 ADAM30Q9UKF2 790 aa20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 LSM4Q9Y4Z0 139 aaKnown RBP20.31■□□□□ 0.84
CDKN2A-201ENST00000304494 HPGDSO60760 199 aa20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 ELK1P19419 428 aa20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 RPL8P62917 257 aaKnown RBP20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 RHOGP84095 191 aa20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 GPR107Q5VW38 600 aa20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 SNX29P2Q8IUI4 249 aa20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 OR51H1Q8NH63 302 aa20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 NAA50Q9GZZ1 169 aaKnown RBP20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 ZNF257Q9Y2Q1 563 aa20.3■□□□□ 0.84
CDKN2A-201ENST00000304494 TRBV9A0A0B4J1U6 114 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 DPPA5A6NC42 116 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 TEX22C9J3V5 150 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 NQO2P16083 231 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 HRH1P35367 487 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 OR4A47Q6IF82 309 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 LYSMD2Q8IV50 215 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 CMTM1Q8IZ96 169 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 NECAP1Q8NC96 275 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 FYTTD1Q96QD9 318 aaKnown RBP20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 PLEKHA2Q9HB19 425 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 HRASLSQ9HDD0 168 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 AKIP1Q9NQ31 210 aa20.29■□□□□ 0.84
CDKN2A-201ENST00000304494 HMX3A6NHT5 357 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 PRH1P02810 166 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 ZNF735P0CB33 412 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 ZNF182P17025 639 aaPredicted RBP20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 HLA-GP17693 338 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 HLA-DMAP28067 261 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 ATP5G2Q06055 141 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 KLF5Q13887 457 aaPredicted RBP20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 GPR141Q7Z602 305 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 SLC2A9Q9NRM0 540 aa20.28■□□□□ 0.84
CDKN2A-201ENST00000304494 NPIPB5A8MRT5 1133 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 FAM25AB3EWG3 89 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 FAM25CB3EWG5 89 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 FAM25GB3EWG6 89 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 RBMXL2O75526 392 aaKnown RBP20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 RCVRNP35243 200 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 ZNF45Q02386 682 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 POU2AF1Q16633 256 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 TATDN3Q17R31 274 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 FAM209BQ5JX69 171 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 COMMD9Q9P000 198 aa20.27■□□□□ 0.84
CDKN2A-201ENST00000304494 TNCP24821 2201 aa20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 PGLYRP1O75594 196 aaPredicted RBP20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 DHFRP00374 187 aa20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 IL6RP08887 468 aaPredicted RBP20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 FGF2P09038 288 aa20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 SPNP16150 400 aa20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 TSPAN5P62079 268 aa20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 EXOSC2Q13868 293 aaKnown RBP20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 RPEL1Q2QD12 228 aa20.26■□□□□ 0.83
CDKN2A-201ENST00000304494 DNAH9Q9NYC9 4486 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 E7EUB6 86 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 RLN1P04808 185 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 ALDH3B2P48448 385 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 LPCAT3Q6P1A2 487 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 DMBX1Q8NFW5 382 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 OR9G4Q8NGQ1 327 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 RSRP1Q9BUV0 290 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 FXYD6Q9H0Q3 95 aa20.25■□□□□ 0.83
CDKN2A-201ENST00000304494 GPR31O00270 319 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 S1PR2O95136 353 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 TRBV12-3P01733 135 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 F2RP25116 425 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 S100GP29377 79 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 SYNJ2BPP57105 145 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 ERVK-16P61578 105 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 VAX1Q5SQQ9 334 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 TMEM140Q9NV12 185 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 SMAD5-AS1Q9Y6J3 95 aa20.24■□□□□ 0.83
CDKN2A-201ENST00000304494 UPK2O00526 184 aa20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 OR2J3O76001 311 aa20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 CRYGCP07315 174 aa20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 NHLRC4P0CG21 123 aaPredicted RBP20.23■□□□□ 0.83
CDKN2A-201ENST00000304494 GP9P14770 177 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms