RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 ERVK-16P61578 105 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 RUNX1Q01196 453 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 STEAP1BQ6NZ63 245 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 ETV3LQ6ZN32 361 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 C18orf65Q6ZTR6 163 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 LINC00482Q8N8I6 264 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 DGCR14Q96DF8 476 aaKnown RBP13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 ZNF486Q96H40 463 aaPredicted RBP13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 P2RX4Q99571 388 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 MCRIP2Q9BUT9 160 aaKnown RBP13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 RSRP1Q9BUV0 290 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 TINAGL1Q9GZM7 467 aaPredicted RBP13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 KLK15Q9H2R5 256 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 ZNF355PQ9NSJ1 428 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 FAM212BQ9NTI7 297 aaPredicted RBP13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 BET1LQ9NYM9 111 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 NDUFA13Q9P0J0 144 aa13.18□□□□□ -0.3
NDUFA3-201ENST00000303553 MSGN1A6NI15 193 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 GSTZ1O43708 216 aaPredicted RBP13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 FGF2P09038 288 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 TNFSF8P32971 234 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 ECI1P42126 302 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 POU2AF1Q16633 256 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 SAMD5Q5TGI4 173 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 OR4A47Q6IF82 309 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 SSX9Q7RTT3 188 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 MRPL41Q8IXM3 137 aaKnown RBP13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 RAX2Q96IS3 184 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
NDUFA3-201ENST00000303553 A0A0G2JLM5 398 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 BRI3O95415 125 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 TRGV3P03979 118 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 OR8U8P0C7N1 319 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 PGAM2P15259 253 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 RPL8P62917 257 aaKnown RBP13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 PHLDA2Q53GA4 152 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 LHFPL1Q86WI0 220 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 SLC2A9Q9NRM0 540 aa13.16□□□□□ -0.3
NDUFA3-201ENST00000303553 MEGF8Q7Z7M0 2845 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 DISC1C4P0D8 188 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 G3V4G9 280 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 S1PR2O95136 353 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 AKAIN1P0CW23 69 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 RPL27AP46776 148 aaKnown RBP13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 RAB25P57735 213 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 KIAA0141Q14154 515 aaPredicted RBP13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 SCGB2B2Q4G0G5 96 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 OR5T1Q8NG75 326 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 OR11H1Q8NG94 326 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 TERB2Q8NHR7 220 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 DPF1Q92782 380 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 MS4A10Q96PG2 267 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 GNB4Q9HAV0 340 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 COA4Q9NYJ1 87 aa13.15□□□□□ -0.3
NDUFA3-201ENST00000303553 C13orf42A0A1B0GVH6 325 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 MARCH11A6NNE9 402 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 I3L521 148 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 OR9G9P0C7N8 305 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 HLA-GP17693 338 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 RND3P61587 244 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 DEFA6Q01524 100 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 ZNF616Q08AN1 781 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 FHL3Q13643 280 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 KPRPQ5T749 579 aaPredicted RBP13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 TBC1D26Q86UD7 250 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 C1QL4Q86Z23 238 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 CCDC71LQ8N9Z2 235 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 OR4D10Q8NGI6 311 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 CASTOR1Q8WTX7 329 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 PRRT1Q99946 306 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
NDUFA3-201ENST00000303553 DPPA5A6NC42 116 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 DHFRP00374 187 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 IGLL1P15814 213 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 PTBP1P26599 531 aaKnown RBP eCLIP13.13□□□□□ -0.316e-7■■■■■ 27.6
NDUFA3-201ENST00000303553 LPAR6P43657 344 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 PPP5CP53041 499 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 SURF2Q15527 256 aaPredicted RBP13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 BEAN1Q3B7T3 259 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 OXLD1Q5BKU9 147 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 CADM3Q8N126 398 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 OR1N2Q8NGR9 330 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 USMG5Q96IX5 58 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 OR5B12Q96R08 314 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 SOSTQ9BQB4 213 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 COMMD5Q9GZQ3 224 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 TNCP24821 2201 aa13.13□□□□□ -0.31
NDUFA3-201ENST00000303553 NOTCH1P46531 2555 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 ANKRD20A5PA0PJZ0 165 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 UPK2O00526 184 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 SERPINE2P07093 398 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms