RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CX3CL1P78423 397 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 MRPL32Q9BYC8 188 aaKnown RBP11.85□□□□□ -0.51
PRKCB-201ENST00000303531 ZNF703Q9H7S9 590 aaPredicted RBP11.85□□□□□ -0.51
PRKCB-201ENST00000303531 IGKV3D-15A0A087WSY6 115 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 J3QW42 95 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 CLEC7AQ9BXN2 247 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 ZNF506Q5JVG8 444 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 LINC00518Q8N0U6 118 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 FAM53AQ6NSI3 398 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-201ENST00000303531 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
PRKCB-201ENST00000303531 PHLDA3Q9Y5J5 127 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 TMEM30BQ3MIR4 351 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 OR10S1Q8NGN2 331 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 ZCCHC14Q8WYQ9 949 aaKnown RBP11.84□□□□□ -0.51
PRKCB-201ENST00000303531 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-201ENST00000303531 SCN10AQ9Y5Y9 1956 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 ZNF236Q9UL36 1845 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 IGHV1-69-2A0A0G2JMI3 117 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 MOSP00540 346 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 TMEM238LA0A1B0GVL6 79 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 A6NJY4 79 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 H7C2G1 150 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 FOLR2P14207 255 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 RPS20P60866 119 aaKnown RBP11.84□□□□□ -0.51
PRKCB-201ENST00000303531 CENPWQ5EE01 88 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 MIEN1Q9BRT3 115 aa11.84□□□□□ -0.51
PRKCB-201ENST00000303531 GAGE10A6NGK3 116 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 K7ERU9 68 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 GDF9O60383 454 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 SOD3P08294 240 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 C12orf54Q6X4T0 127 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 RTBDNQ9BSG5 229 aaPredicted RBP11.83□□□□□ -0.52
PRKCB-201ENST00000303531 DNLZQ5SXM8 178 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 GOLT1AQ6ZVE7 132 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 PNKDQ8N490 385 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 NPCDR1Q9BY65 106 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 EFNB1P98172 346 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 C12orf77C9JDV5 145 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 A0A0B4J293 547 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
PRKCB-201ENST00000303531 IL6RP08887 468 aaPredicted RBP11.83□□□□□ -0.52
PRKCB-201ENST00000303531 SIAH2O43255 324 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 LAMTOR1Q6IAA8 161 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 FDCSPQ8NFU4 85 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 PROB1E7EW31 1015 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 TMEM250H0YL14 139 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 LOC107984156A0A0G2JMH3 177 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 FABP2P12104 132 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 DNM1P46Q6ZS02 220 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 LINC00305Q7Z4B0 112 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 ARL17AQ8IVW1 177 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 TRBV9A0A0B4J1U6 114 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 SMAGPQ0VAQ4 97 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 SLC25A34Q6PIV7 304 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 AKIRIN1Q9H9L7 192 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-201ENST00000303531 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
PRKCB-201ENST00000303531 PLXNA1Q9UIW2 1896 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 C9orf172C9J069 976 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 GATAD1Q8WUU5 269 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 LIPFP07098 398 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
PRKCB-201ENST00000303531 CBLN1P23435 193 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 ZNF362Q5T0B9 420 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-201ENST00000303531 OR10AG1Q8NH19 301 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 NPIPB11E5RHQ5 1161 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 NPIPB6E9PJ23 425 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-201ENST00000303531 MBNL2Q5VZF2 373 aaKnown RBP11.81□□□□□ -0.52
PRKCB-201ENST00000303531 CBLN4Q9NTU7 201 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-201ENST00000303531 IGHV3OR16-12A0A075B7B8 117 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 A0A0G2JMM0 328 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 A0A1W2PPB8 328 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 A0A1W2PRS3 328 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 KIR3DP1A8MWS1 328 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 TBX6O95947 436 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-201ENST00000303531 IL4P05112 153 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 LY6EQ16553 131 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 GALNT14Q96FL9 552 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 HERPUD1Q15011 391 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 IGHV3-35A0A0C4DH35 117 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 HLA-DRB1P01911 266 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 NR2C2APQ86WQ0 139 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 KIF26BQ2KJY2 2108 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 ARL6IP6Q8N6S5 226 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 TFF3Q07654 80 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 GGACTQ9BVM4 153 aa11.81□□□□□ -0.52
PRKCB-201ENST00000303531 CECR9P0C854 216 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 UCP1P25874 307 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 TCF24Q7RTU0 167 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 PIMREGQ9BSJ6 248 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms