RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TMEM131Q92545 1883 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 C1QL1O75973 258 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 PRSS8Q16651 343 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF818PQ6ZRF7 136 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 OR5A1Q8NGJ0 315 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 GP6Q9HCN6 339 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 CX3CL1P78423 397 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 C1QTNF9BB2RNN3 333 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 FAM90A1Q86YD7 464 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 GPR82Q96P67 336 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 TM4SF5O14894 197 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 MPZP25189 248 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 MAFAQ8NHW3 353 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-201ENST00000302516 AHRRA9YTQ3 701 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 C16orf47Q6ZP98 133 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-201ENST00000302516 CIARTQ8N365 385 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-201ENST00000302516 LRTM2Q8N967 370 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 H3BRM9 83 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 MYF5P13349 255 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 TMEM54Q969K7 222 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 TNS1Q9HBL0 1735 aaKnown RBP6.55□□□□□ -1.36
SF3B3-201ENST00000302516 NCKAP5O14513 1909 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 CLDND2Q8NHS1 167 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 AICDAQ9GZX7 198 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 DOCK8Q8NF50 2099 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 TMSB15BA0A087X1C1 80 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 FAM90A9PA6NNJ1 464 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 GDF9O60383 454 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 GHRHP01286 108 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 EMP1P54849 157 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
SF3B3-201ENST00000302516 CXorf66Q5JRM2 361 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-201ENST00000302516 WNT2BQ93097 391 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 TYMSP04818 313 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 IGLV3-21P80748 117 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-201ENST00000302516 WNT5BQ9H1J7 359 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 GEMIN7Q9H840 131 aaKnown RBP6.54□□□□□ -1.36
SF3B3-201ENST00000302516 JKAMPQ9P055 326 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 LOXL3P58215 753 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 OR4X2Q8NGF9 303 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF385AQ96PM9 386 aaKnown RBP6.54□□□□□ -1.36
SF3B3-201ENST00000302516 DLL3Q9NYJ7 618 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 AKAP6Q13023 2319 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 CEP250Q9BV73 2442 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 IZUMO1RA6ND01 250 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 H7C2G1 150 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 UBE2CO00762 179 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 UCNP55089 124 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 ASPHD2Q6ICH7 369 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 TCF19Q9Y242 345 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 PLXNA2O75051 1894 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 ID4P47928 161 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 LAMTOR1Q6IAA8 161 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 OR5P3Q8WZ94 311 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 RPP21Q9H633 154 aaKnown RBP6.54□□□□□ -1.36
SF3B3-201ENST00000302516 LPAR2Q9HBW0 351 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 ABCA7Q8IZY2 2146 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 TMEM229AB2RXF0 380 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 SPINT1O43278 529 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 CTAG1AP78358 180 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 SMOC1Q9H4F8 434 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 TMEM242Q9NWH2 141 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 ARL6IP6Q8N6S5 226 aa6.54□□□□□ -1.36
SF3B3-201ENST00000302516 TCF20Q9UGU0 1960 aaKnown RBP6.53□□□□□ -1.36
SF3B3-201ENST00000302516 MNX1P50219 401 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-201ENST00000302516 RAX2Q96IS3 184 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 SDHCQ99643 169 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-201ENST00000302516 C7orf71A4D174 169 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 AGFG2O95081 481 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 CBLN1P23435 193 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 TBR1Q16650 682 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 C1QL4Q86Z23 238 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 CACNG8Q8WXS5 425 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 A0A1B0GUT8 65 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 EEF1AKMT3Q96AZ1 226 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF501Q96CX3 271 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF488Q96MN9 340 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 CLEC7AQ9BXN2 247 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 CENPVL1A0A0U1RR11 272 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 KLF4O43474 513 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 RND2P52198 227 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 FAM106AQ4KMX7 169 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 CTHRC1Q96CG8 243 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 NEU1Q99519 415 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 LINC00470Q9BZP3 86 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 F11RQ9Y624 299 aaKnown RBP6.53□□□□□ -1.36
SF3B3-201ENST00000302516 ATP5G2Q06055 141 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 OR9G1Q8NH87 305 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 MRAP2Q96G30 205 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 UBTD1Q9HAC8 227 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 PGPA6NDG6 321 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 TMEM262E9PQX1 116 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 PAX1P15863 534 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 SCARF2Q96GP6 870 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-201ENST00000302516 A0A1B0GW64 132 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 OR10J3Q5JRS4 329 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 BEND2Q8NDZ0 799 aa6.53□□□□□ -1.36
SF3B3-201ENST00000302516 RNASEH2CQ8TDP1 164 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms