RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 FAM168AQ92567 244 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 A0A0U1RQV5 110 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 OR10J4P0C629 311 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 LGALS4P56470 323 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 OR5A2Q8NGI9 324 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 SPSB1Q96BD6 273 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 A0A096LPE4 126 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 GJE1A6NN92 205 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 DEFB108AA8MXU0 73 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 ARR3P36575 388 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 DEFB133Q30KQ1 61 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 VKORC1L1Q8N0U8 176 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 MUC15Q8N387 334 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 TMEM186Q96B77 213 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 LINC00479Q96M42 142 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 CPAMD8Q8IZJ3 1885 aa12.08□□□□□ -0.47
CDT1-201ENST00000301019 COL4A2P08572 1712 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 C22orf46C9J442 243 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 H3BUT2 72 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 CSN3P07498 182 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
CDT1-201ENST00000301019 MRPS21P82921 87 aaKnown RBP12.08□□□□□ -0.48
CDT1-201ENST00000301019 PDLIM3Q53GG5 364 aaPredicted RBP12.08□□□□□ -0.48
CDT1-201ENST00000301019 SAMD13Q5VXD3 122 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 GUCD1Q96NT3 240 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 CDC42EP3Q9UKI2 254 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 MRPS16Q9Y3D3 137 aaKnown RBP12.08□□□□□ -0.48
CDT1-201ENST00000301019 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 DHHO43323 396 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 NEURL1O76050 574 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 BVES-AS1Q5T3Y7 98 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 FER1L6-AS1Q8NA97 138 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 SPENQ96T58 3664 aaKnown RBP12.08□□□□□ -0.48
CDT1-201ENST00000301019 TNCP24821 2201 aa12.08□□□□□ -0.48
CDT1-201ENST00000301019 MT-CO3P00414 261 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 APCSP02743 223 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 SRFP11831 508 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 TMEM147Q9BVK8 224 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 FAM181BA6NEQ2 426 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 PDE6DO43924 150 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 CGAP01215 116 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 NHLH1Q02575 133 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 PCSK4Q6UW60 755 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 LHFPL2Q6ZUX7 228 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 OR4P4Q8NGL7 312 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 HINT2Q9BX68 163 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 IGHV3-43A0A0B4J1X8 118 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 C7orf71A4D174 169 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 K7EMI3 77 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 IGHV3-43DP0DP04 118 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 NCOR1P1Q9H4R4 102 aa12.07□□□□□ -0.48
CDT1-201ENST00000301019 HAND1O96004 215 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 FASLGP48023 281 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 MFAP2P55001 183 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 UBE2G1P62253 170 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 MEF2CQ06413 473 aaPredicted RBP12.06□□□□□ -0.48
CDT1-201ENST00000301019 PRDX4Q13162 271 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 MORN2Q502X0 79 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
CDT1-201ENST00000301019 OXGR1Q96P68 337 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 TRAPPC2LQ9UL33 140 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 CER1O95813 267 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 ZNF137PP52743 207 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 VWC2Q2TAL6 325 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 LRRC10Q5BKY1 277 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 DEFB123Q8N688 67 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 SH3BGRL2Q9UJC5 107 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 PILRBQ9UKJ0 227 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 EML6Q6ZMW3 1958 aa12.06□□□□□ -0.48
CDT1-201ENST00000301019 CEBPDP49716 269 aaPredicted RBP12.05□□□□□ -0.48
CDT1-201ENST00000301019 Q0VG73 95 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 TMEM136Q6ZRR5 245 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 TPRX1Q8N7U7 411 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 C5orf17Q8NAS9 161 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 RFESDQ8TAC1 157 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 C5orf49A4QMS7 147 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 CD1BP29016 333 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 GNG4P50150 75 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 LINC00696Q6ZRV3 163 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 ST8SIA1Q92185 356 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 ZNF355PQ9NSJ1 428 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 A0A1W2PQD3 144 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 TNFSF11O14788 317 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 RAC2P15153 192 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 SPATA46Q5T0L3 261 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 C18orf32Q8TCD1 76 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 PERPQ96FX8 193 aa12.05□□□□□ -0.48
CDT1-201ENST00000301019 LRRC61Q9BV99 259 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms