RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 HIPK2Q9H2X6 1198 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 UNKLQ9H9P5 680 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 TMEM14BQ9NUH8 114 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 IL6RP08887 468 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 METTL15P1P0C7V9 234 aa12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 PAX1P15863 534 aa12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 DSCR9P59020 149 aa12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 RPS16P62249 146 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 STPG2Q8N412 459 aa12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 TSNAXQ99598 290 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 ATP5SQ99766 215 aa12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 GINS3Q9BRX5 216 aa12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 MS4A7Q9GZW8 240 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 FKBP11Q9NYL4 201 aa12.73□□□□□ -0.37
HERPUD1-201ENST00000300302 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 UPK2O00526 184 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 FGF2P09038 288 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 SAA1P0DJI8 122 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 PAX2Q02962 417 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 TMEM14EPQ6UXP3 125 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 VMO1Q7Z5L0 202 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 MOB3BQ86TA1 216 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 OR4A5Q8NH83 315 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 NRGNQ92686 78 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 PERPQ96FX8 193 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 CITED4Q96RK1 184 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 ZNF257Q9Y2Q1 563 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 KBTBD11O94819 623 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 LGALS7P47929 136 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 HSPE1P61604 102 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 SPINK9Q5DT21 86 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 COMMD7Q86VX2 200 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 PUSL1Q8N0Z8 303 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 TCF19Q9Y242 345 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 OR51B2Q9Y5P1 312 aa12.72□□□□□ -0.37
HERPUD1-201ENST00000300302 VWC2LB2RUY7 222 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 FBXO24O75426 580 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 SEC11BP0C7V7 166 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 HOXA1P49639 335 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 VMA21Q3ZAQ7 101 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 TPTE2P1Q5T6R2 138 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 ZNF787Q6DD87 383 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 LILRB2Q8N423 598 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 SIRPDQ9H106 197 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 ENY2Q9NPA8 101 aa12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 HEYLQ9NQ87 328 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 POLR3KQ9Y2Y1 108 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-201ENST00000300302 ODF3BA8MYP8 253 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 TOX4O94842 621 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 IFNA5P01569 189 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 SPP1P10451 314 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 USF1P22415 310 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 KLRD1Q13241 179 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 HIST2H2BCQ6DN03 193 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 HCP5Q6MZN7 132 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 OR4C12Q96R67 309 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 MMP26Q9NRE1 261 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 PFDN2Q9UHV9 154 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 UTP20O75691 2785 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 IGHV3-72A0A0B4J1Y9 119 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 FGF16O43320 207 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 DVL1P1P54792 670 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 SLC25A24Q6NUK1 477 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 OR10P1Q8NGE3 313 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 OR5B3Q8NH48 314 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 PINX1Q96BK5 328 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 RBMXL1Q96E39 390 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 GNPNAT1Q96EK6 184 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 CXorf58Q96LI9 332 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 MED9Q9NWA0 146 aa12.7□□□□□ -0.38
HERPUD1-201ENST00000300302 AKAP6Q13023 2319 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 IFNA10P01566 189 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 VDAC2P45880 294 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 LGALS4P56470 323 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 SLC38A11Q08AI6 406 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 ATP6V1FQ16864 119 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 OR8G2PQ6IF36 304 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 TMEM167AQ8TBQ9 72 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 COMMD5Q9GZQ3 224 aa12.69□□□□□ -0.38
HERPUD1-201ENST00000300302 IGHV4-61A0A0C4DH41 118 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 HOXB4P17483 251 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 SULT1A2P50226 295 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 PRCDQ00LT1 54 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 CCDC144NLQ6NUI1 221 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 HAPLN4Q86UW8 402 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 SCGB1C1Q8TD33 95 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 RNF5Q99942 180 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 PLEKHA3Q9HB20 300 aa12.68□□□□□ -0.38
HERPUD1-201ENST00000300302 ARHGAP32A7KAX9 2087 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms