RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 FBLN7Q53RD9 439 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 TREML4Q6UXN2 200 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 NIT1Q86X76 327 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 MGST2Q99735 147 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 MS4A5Q9H3V2 200 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 HEYLQ9NQ87 328 aaPredicted RBP10.86□□□□□ -0.67
TVP23A-201ENST00000299866 SLC35D1Q9NTN3 355 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 SERTAD4Q9NUC0 356 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 YLPM1P49750 1951 aaKnown RBP10.86□□□□□ -0.67
TVP23A-201ENST00000299866 TRAV9-1A0A075B6T8 112 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 IGHV5-10-1A0A0J9YXX1 117 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 CA2P00918 260 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 LTC4SQ16873 150 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 ASPHD1Q5U4P2 390 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 MRPL14Q6P1L8 145 aaKnown RBP10.86□□□□□ -0.67
TVP23A-201ENST00000299866 GALMQ96C23 342 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 FAM234AQ9H0X4 552 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 SEPSECSQ9HD40 501 aaKnown RBP10.86□□□□□ -0.67
TVP23A-201ENST00000299866 TFF1P04155 84 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 ZNF718Q3SXZ3 478 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 STUMQ69YW2 141 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 RFESDQ8TAC1 157 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 KCNE4Q8WWG9 221 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 OR5B21A6NL26 309 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 CDIPTO14735 213 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 ACTL6BO94805 426 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 Q56UQ5 140 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 PQLC2Q6ZP29 291 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 TMEM136Q6ZRR5 245 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 OR4P4Q8NGL7 312 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 NINJ1Q92982 152 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 LOXL4Q96JB6 756 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 IMMP1LQ96LU5 166 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 CLEC7AQ9BXN2 247 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 LINC00473A8K010 186 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 FAM166BA8MTA8 275 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 J3QT63 122 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 CGAP01215 116 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 COX6A1P12074 109 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 GDF1P27539 372 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 RELBQ01201 579 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 CENPWQ5EE01 88 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 DCAF12Q5T6F0 453 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 ABHD12Q8N2K0 398 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 TSKUQ8WUA8 353 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 GGTLC1Q9BX51 225 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 FRYLO94915 3013 aa10.85□□□□□ -0.67
TVP23A-201ENST00000299866 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 BMPR1BO00238 502 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 CRYBB3P26998 211 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 OPRK1P41145 380 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 GNG4P50150 75 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 PLP2Q04941 152 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 TUSC5Q8IXB3 177 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 ST6GALNAC6Q969X2 333 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 VPS25Q9BRG1 176 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 TP73-AS1Q9UF72 201 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 MPC1Q9Y5U8 109 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 FRYQ5TBA9 3013 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 TRBV9A0A0B4J1U6 114 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 K7EP13 123 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 S100A7P31151 101 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 AESQ08117 197 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 VKORC1L1Q8N0U8 176 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 TPRX1Q8N7U7 411 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 MRGPRDQ8TDS7 321 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 KIAA1549Q9HCM3 1950 aa10.84□□□□□ -0.67
TVP23A-201ENST00000299866 IGHV2OR16-5A0A0B4J2B6 119 aa10.83□□□□□ -0.67
TVP23A-201ENST00000299866 TOMM40O96008 361 aa10.83□□□□□ -0.67
TVP23A-201ENST00000299866 GRPP07492 148 aa10.83□□□□□ -0.67
TVP23A-201ENST00000299866 MGST1P10620 155 aaKnown RBP10.83□□□□□ -0.67
TVP23A-201ENST00000299866 TMEM249Q2WGJ8 235 aa10.83□□□□□ -0.67
TVP23A-201ENST00000299866 WDR73Q6P4I2 378 aa10.83□□□□□ -0.67
TVP23A-201ENST00000299866 POM121L2Q96KW2 1035 aa10.83□□□□□ -0.67
TVP23A-201ENST00000299866 MBNL3Q9NUK0 354 aaKnown RBP10.83□□□□□ -0.67
TVP23A-201ENST00000299866 HELTA6NFD8 242 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 HBZP02008 142 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 CX3CL1P78423 397 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
TVP23A-201ENST00000299866 SCCPDHQ8NBX0 429 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 PHF7Q9BWX1 381 aaPredicted RBP10.83□□□□□ -0.68
TVP23A-201ENST00000299866 CHODLQ9H9P2 273 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 SH2D2AQ9NP31 389 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 GCM1Q9NP62 436 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 PSG11Q9UQ72 335 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 CELSR3Q9NYQ7 3312 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 PSPNO60542 156 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 CA1P00915 261 aaPredicted RBP10.83□□□□□ -0.68
TVP23A-201ENST00000299866 TNFSF4P23510 183 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 PRR31Q5SQ13 230 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 PRAMEF5Q5TYX0 476 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 PRAMEF6Q5VXH4 476 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 WDR86Q86TI4 376 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 PKIBQ9C010 78 aa10.83□□□□□ -0.68
TVP23A-201ENST00000299866 LOC102724200A0A096LPH7 203 aaPredicted RBP10.82□□□□□ -0.68
TVP23A-201ENST00000299866 MMP23AO75900 390 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 MT-ND6P03923 174 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms