RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SOX15O60248 233 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 GALR1P47211 349 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 RBMXL3Q8N7X1 1067 aaKnown RBP11.25□□□□□ -0.61
CDH8-201ENST00000299345 FAM216AQ8WUB2 273 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 PXMP4Q9Y6I8 212 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 IGLV3-9A0A075B6K5 115 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 K7EM74 188 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 HSPE1P61604 102 aaKnown RBP11.25□□□□□ -0.61
CDH8-201ENST00000299345 NPVFQ9HCQ7 196 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 IDI2-AS1Q9NZ38 188 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 FABP1P07148 127 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 HOXA5P20719 270 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 RELBQ01201 579 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 OR10A7Q8NGE5 316 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 OR52E5Q8NH55 327 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 H1FXQ92522 213 aaKnown RBP11.24□□□□□ -0.61
CDH8-201ENST00000299345 MS4A5Q9H3V2 200 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 SLC35D1Q9NTN3 355 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 CDX1P47902 265 aaPredicted RBP11.24□□□□□ -0.61
CDH8-201ENST00000299345 OR4A47Q6IF82 309 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 DUX4L9Q6RFH8 374 aaPredicted RBP11.24□□□□□ -0.61
CDH8-201ENST00000299345 GFRALQ6UXV0 394 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 SSX3Q99909 188 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 PLEKHA3Q9HB20 300 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 SEC14L6B5MCN3 397 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 RPL23P62829 140 aaKnown RBP11.24□□□□□ -0.61
CDH8-201ENST00000299345 RTP5Q14D33 572 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 GGACTQ9BVM4 153 aa11.24□□□□□ -0.61
CDH8-201ENST00000299345 APC2O95996 2303 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 ZNF729A6NN14 1252 aaPredicted RBP11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 B2MP61769 119 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 PMS2P11Q13670 270 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
CDH8-201ENST00000299345 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 YPEL4Q96NS1 127 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 A0A1B0GWJ7 208 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 GFRA3O60609 400 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 MT-CO2P00403 227 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 LHBP01229 141 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 KCNIP4Q6PIL6 250 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 TEPPQ6URK8 271 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 OR10D4PQ8NGN7 298 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 MIOXQ9UGB7 285 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 PDE6DO43924 150 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 CHRNA7P36544 502 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 GATA4P43694 442 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 C17orf58Q2M2W7 97 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 VWC2Q2TAL6 325 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 C3orf36Q3SXR2 165 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 RND1Q92730 232 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 SEBOXQ9HB31 216 aaPredicted RBP11.23□□□□□ -0.61
CDH8-201ENST00000299345 DYNLRB1Q9NP97 96 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 AURKAIP1Q9NWT8 199 aaPredicted RBP11.23□□□□□ -0.61
CDH8-201ENST00000299345 OR51B2Q9Y5P1 312 aa11.23□□□□□ -0.61
CDH8-201ENST00000299345 CHD3Q12873 2000 aaKnown RBP11.23□□□□□ -0.61
CDH8-201ENST00000299345 APOA2P02652 100 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 OR4A8P0C604 315 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 CEACAM8P31997 349 aaPredicted RBP11.22□□□□□ -0.61
CDH8-201ENST00000299345 OPRK1P41145 380 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 RND2P52198 227 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 ZCCHC24Q8N2G6 241 aaKnown RBP11.22□□□□□ -0.61
CDH8-201ENST00000299345 CCL17Q92583 94 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 FRZBQ92765 325 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 GAL3ST2Q9H3Q3 398 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 PRNDQ9UKY0 176 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 C15orf61A6NNL5 157 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 J3QR06 171 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 NDUFB4O95168 129 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 RPL31P62899 125 aaKnown RBP11.22□□□□□ -0.61
CDH8-201ENST00000299345 NUBP1P53384 320 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 CR1LQ2VPA4 569 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 STUMQ69YW2 141 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 SPNS3Q6ZMD2 512 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 Q8TCH9 128 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 CORO2AQ92828 525 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 GAFA1Q96PS6 74 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 PFDN5Q99471 154 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 LRFN3Q9BTN0 628 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 SAP30LQ9HAJ7 183 aa11.22□□□□□ -0.61
CDH8-201ENST00000299345 SLC25A10Q9UBX3 287 aaPredicted RBP11.22□□□□□ -0.61
CDH8-201ENST00000299345 TRBV24-1A0A075B6N3 115 aa11.21□□□□□ -0.61
CDH8-201ENST00000299345 ARL14EPLP0DKL9 152 aa11.21□□□□□ -0.61
CDH8-201ENST00000299345 VDAC2P45880 294 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms