RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 OR4S2Q8NH73 311 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 C2CD4CQ8TF44 421 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 BIN3Q9NQY0 253 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 MED13LQ71F56 2210 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 UMAD1C9J7I0 102 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 CT45A6P0DMU7 189 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 CT45A5P0DMU8 189 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 CT45A7P0DMV0 189 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 KIR2DS2P43631 304 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 LRRC75BQ2VPJ9 315 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 TMEM30BQ3MIR4 351 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 AKIRIN2Q53H80 203 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 SPSB3Q6PJ21 355 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 ETV3LQ6ZN32 361 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 ZFP82Q8N141 532 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 TET2Q6N021 2002 aaPredicted RBP17.41■□□□□ 0.38
SOX17-201ENST00000297316 UBE2L5PA0A1B0GUS4 154 aa17.4■□□□□ 0.38
SOX17-201ENST00000297316 ZNF98A6NK75 572 aa17.4■□□□□ 0.38
SOX17-201ENST00000297316 PPT1P50897 306 aa17.4■□□□□ 0.38
SOX17-201ENST00000297316 VSIRQ9H7M9 311 aa17.4■□□□□ 0.38
SOX17-201ENST00000297316 COLCA2A8K830 154 aa17.39■□□□□ 0.38
SOX17-201ENST00000297316 FSTL3O95633 263 aa17.39■□□□□ 0.38
SOX17-201ENST00000297316 ERVK-16P61578 105 aa17.39■□□□□ 0.38
SOX17-201ENST00000297316 DIAPH2-AS1Q14236 149 aa17.39■□□□□ 0.38
SOX17-201ENST00000297316 OR10A7Q8NGE5 316 aa17.39■□□□□ 0.38
SOX17-201ENST00000297316 RAB1CQ92928 201 aa17.39■□□□□ 0.38
SOX17-201ENST00000297316 WDR61Q9GZS3 305 aaKnown RBP17.39■□□□□ 0.38
SOX17-201ENST00000297316 VPS13CQ709C8 3753 aa17.39■□□□□ 0.38
SOX17-201ENST00000297316 IFNA17P01571 189 aa17.39■□□□□ 0.37
SOX17-201ENST00000297316 HNF4GQ14541 408 aa17.39■□□□□ 0.37
SOX17-201ENST00000297316 GUK1Q16774 197 aa17.39■□□□□ 0.37
SOX17-201ENST00000297316 WDR25Q64LD2 544 aaPredicted RBP17.39■□□□□ 0.37
SOX17-201ENST00000297316 OR4A16Q8NH70 328 aa17.39■□□□□ 0.37
SOX17-201ENST00000297316 CHODLQ9H9P2 273 aa17.39■□□□□ 0.37
SOX17-201ENST00000297316 FAM90A9PA6NNJ1 464 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 IGHV1-8P0DP01 117 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 REG1BP48304 166 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 AKR1C8PQ5T2L2 129 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 OR8B3Q8NGG8 313 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 SCGB1C1Q8TD33 95 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 TIMD4Q96H15 378 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 OR8B2Q96RD0 313 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 C15orf62A8K5M9 175 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 IGKV1-16P04430 117 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 AKR1C3P42330 323 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 SP5Q6BEB4 398 aaPredicted RBP17.38■□□□□ 0.37
SOX17-201ENST00000297316 NEIL1Q96FI4 390 aaPredicted RBP17.38■□□□□ 0.37
SOX17-201ENST00000297316 RHOVQ96L33 236 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 SMCO4Q9NRQ5 59 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 KPTNQ9Y664 436 aa17.38■□□□□ 0.37
SOX17-201ENST00000297316 TRBV23-1A0A0A0MS06 115 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 MYOD1P15172 320 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 OR4A47Q6IF82 309 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 CIB3Q96Q77 187 aaPredicted RBP17.37■□□□□ 0.37
SOX17-201ENST00000297316 MIOXQ9UGB7 285 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 C22orf46C9J442 243 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 ZNF833PQ6ZTB9 187 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 COMMD1Q8N668 190 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 ADTRPQ96IZ2 230 aa17.37■□□□□ 0.37
SOX17-201ENST00000297316 MRPL20Q9BYC9 149 aaKnown RBP17.37■□□□□ 0.37
SOX17-201ENST00000297316 UBR5O95071 2799 aaPredicted RBP17.37■□□□□ 0.37
SOX17-201ENST00000297316 FAM208BQ5VWN6 2430 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 J3QR06 171 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 SPCS3P61009 180 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 TAF15Q92804 592 aaKnown RBP eCLIP17.36■□□□□ 0.37
SOX17-201ENST00000297316 CLCC1Q96S66 551 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 C12orf57Q99622 126 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 RPRMQ9NS64 109 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 PPIAL4CA0A0B4J2A2 164 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 SRRM4A7MD48 611 aaKnown RBP17.36■□□□□ 0.37
SOX17-201ENST00000297316 PPIAL4GP0DN37 164 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 VDAC2P45880 294 aaPredicted RBP17.36■□□□□ 0.37
SOX17-201ENST00000297316 RARRES2Q99969 163 aa17.36■□□□□ 0.37
SOX17-201ENST00000297316 ARG1P05089 322 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 SRSF1Q07955 248 aaKnown RBP eCLIP17.35■□□□□ 0.37
SOX17-201ENST00000297316 SSX7Q7RTT5 188 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 ABHD12Q8N2K0 398 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 OR10X1Q8NGY0 326 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 PARD6GQ9BYG4 376 aaPredicted RBP17.35■□□□□ 0.37
SOX17-201ENST00000297316 EIF5A2Q9GZV4 153 aaKnown RBP17.35■□□□□ 0.37
SOX17-201ENST00000297316 RPS10P5Q9NQ39 176 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 SLC35D1Q9NTN3 355 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 SPG11Q96JI7 2443 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 TNCP24821 2201 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 SVEP1Q4LDE5 3571 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 LRRK2Q5S007 2527 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 OR8U8P0C7N1 319 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 ZNF726P1Q15940 193 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 C15orf54Q8N8G6 183 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 OR10P1Q8NGE3 313 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 PSMG3Q9BT73 122 aaPredicted RBP17.35■□□□□ 0.37
SOX17-201ENST00000297316 TCF19Q9Y242 345 aa17.35■□□□□ 0.37
SOX17-201ENST00000297316 C15orf61A6NNL5 157 aa17.34■□□□□ 0.37
SOX17-201ENST00000297316 PDLIM3Q53GG5 364 aaPredicted RBP17.34■□□□□ 0.37
SOX17-201ENST00000297316 OR13D1Q8NGV5 346 aa17.34■□□□□ 0.37
SOX17-201ENST00000297316 OR52E5Q8NH55 327 aa17.34■□□□□ 0.37
SOX17-201ENST00000297316 SFT2D1Q8WV19 159 aa17.34■□□□□ 0.37
SOX17-201ENST00000297316 TMEM170AQ8WVE7 144 aa17.34■□□□□ 0.37
SOX17-201ENST00000297316 TMEM133Q9H2Q1 129 aa17.34■□□□□ 0.37
SOX17-201ENST00000297316 WNK2Q9Y3S1 2297 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms