RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 AURKAIP1Q9NWT8 199 aaPredicted RBP9.67□□□□□ -0.86
RHO-201ENST00000296271 CISD1Q9NZ45 108 aaKnown RBP9.67□□□□□ -0.86
RHO-201ENST00000296271 RALYQ9UKM9 306 aaKnown RBP9.67□□□□□ -0.86
RHO-201ENST00000296271 ANKHD1Q8IWZ3 2542 aaKnown RBP9.66□□□□□ -0.86
RHO-201ENST00000296271 ABCA1O95477 2261 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 TRGV10A0A0A0MS01 117 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 GFRA3O60609 400 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 OR8U8P0C7N1 319 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 VDAC2P45880 294 aaPredicted RBP9.66□□□□□ -0.86
RHO-201ENST00000296271 SELENOVP59797 346 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 OR4A47Q6IF82 309 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 TRAT1Q6PIZ9 186 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 TMEM108Q6UXF1 575 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 HEPN1Q6WQI6 88 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 C1orf174Q8IYL3 243 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 ZNF439Q8NDP4 499 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 SSMEM1Q8WWF3 244 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 MS4A5Q9H3V2 200 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 TUBA4BQ9H853 241 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 SPTBN1Q01082 2364 aaKnown RBP9.66□□□□□ -0.86
RHO-201ENST00000296271 MED13LQ71F56 2210 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 PAX6P26367 422 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 NUBP1P53384 320 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 UBE2G2P60604 165 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 MRGPRGQ86SM5 289 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 HIPK2Q9H2X6 1198 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
RHO-201ENST00000296271 ARHGAP32A7KAX9 2087 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 C17orf100A8MU93 164 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 LYNX1G3V0Z9 82 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 PAGE4O60829 102 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 PLAUP00749 431 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 LYNX1P0DP58 116 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 GRNP28799 593 aaKnown RBP9.65□□□□□ -0.86
RHO-201ENST00000296271 CD1BP29016 333 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 FABP9Q0Z7S8 132 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 MLANAQ16655 118 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 NCMAPQ5T1S8 102 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 MIC13Q5XKP0 118 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 OR51G1Q8NGK1 321 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 PINX1Q96BK5 328 aaKnown RBP9.65□□□□□ -0.86
RHO-201ENST00000296271 C12orf57Q99622 126 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 SMDT1Q9H4I9 107 aa9.65□□□□□ -0.86
RHO-201ENST00000296271 C5orf52A6NGY3 159 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 ZNF98A6NK75 572 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 YIF1AO95070 293 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 CT45A6P0DMU7 189 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 CT45A5P0DMU8 189 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 CT45A7P0DMV0 189 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 FOSL1P15407 271 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 WDR25Q64LD2 544 aaPredicted RBP9.65□□□□□ -0.87
RHO-201ENST00000296271 TREML4Q6UXN2 200 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 CENPVQ7Z7K6 275 aaPredicted RBP9.65□□□□□ -0.87
RHO-201ENST00000296271 OR5T1Q8NG75 326 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 VAX2Q9UIW0 290 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 MALRD1Q5VYJ5 2156 aa9.65□□□□□ -0.87
RHO-201ENST00000296271 PRSS46E5RG02 174 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 NPPCP23582 126 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 HOXA1P49639 335 aaPredicted RBP9.64□□□□□ -0.87
RHO-201ENST00000296271 ERVK-16P61578 105 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 GNB2P62879 340 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 VWC2Q2TAL6 325 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 SLC16A13Q7RTY0 426 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
RHO-201ENST00000296271 NECAP1Q8NC96 275 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 H1FXQ92522 213 aaKnown RBP9.64□□□□□ -0.87
RHO-201ENST00000296271 MGST2Q99735 147 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 PARD6GQ9BYG4 376 aaPredicted RBP9.64□□□□□ -0.87
RHO-201ENST00000296271 IDI2-AS1Q9NZ38 188 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 LAMP3Q9UQV4 416 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 AKAP6Q13023 2319 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 IFNA4P05014 189 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 SPCS3P61009 180 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 RNF212Q495C1 297 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 ARSJQ5FYB0 599 aaPredicted RBP9.64□□□□□ -0.87
RHO-201ENST00000296271 TCTEX1D1Q8N7M0 179 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 OR4F5Q8NH21 305 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 CIB3Q96Q77 187 aaPredicted RBP9.64□□□□□ -0.87
RHO-201ENST00000296271 OR4F4Q96R69 305 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
RHO-201ENST00000296271 CTXND1A0A1B0GTU2 59 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 CYB5BO43169 146 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 S100A6P06703 90 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 IRF2P14316 349 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 TNFSF4P23510 183 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 ATP5G3P48201 142 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 MEF2BQ02080 365 aaPredicted RBP9.63□□□□□ -0.87
RHO-201ENST00000296271 CDSNQ15517 529 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 ADIRFQ15847 76 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 C3orf36Q3SXR2 165 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 SPATA31B1PQ5VZV4 182 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 ZNF709Q8N972 641 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 NUP37Q8NFH4 326 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 OR10W1Q8NGF6 305 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 SMIM7Q9BQ49 75 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 DERL1Q9BUN8 251 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 UNKLQ9H9P5 680 aaKnown RBP9.63□□□□□ -0.87
RHO-201ENST00000296271 SAP30LQ9HAJ7 183 aa9.63□□□□□ -0.87
RHO-201ENST00000296271 SLC25A10Q9UBX3 287 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms