RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PTPRQQ9UMZ3 2332 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 COX6CP09669 75 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SRIP30626 198 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 UQCRFS1P47985 274 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SLC25A47Q6Q0C1 308 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 FGFRL1Q8N441 504 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR8B3Q8NGG8 313 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 FBXW9Q5XUX1 488 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SFXN3Q9BWM7 321 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SH3BGRL3Q9H299 93 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 DNASE2O00115 360 aaPredicted RBP10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 PPIHO43447 177 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 TSPAN2O60636 221 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SNRNP200O75643 2136 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 LINC00869P0C866 280 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 CA7P43166 264 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMEM187Q14656 261 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SPANXN1Q5VSR9 72 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR52M1Q8NGK5 317 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 FAM206AQ9NX38 181 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SHISA3A0PJX4 238 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 PSG4Q00888 419 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 PRNTQ86SH4 94 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 FAM216AQ8WUB2 273 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 SIGLEC12Q96PQ1 595 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 TTTY12Q9BZ98 90 aa10.11□□□□□ -0.79
SYNGAP1-201ENST00000293748 FAM157AC9JC47 383 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 UNC119Q13432 240 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 BHLHA15Q7RTS1 189 aaPredicted RBP10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 MMD2Q8IY49 270 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZDHHC16Q969W1 377 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 Q96M66 194 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 IL36RNQ9UBH0 155 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMEM189A5PLL7 270 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 TNFRSF9Q07011 255 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 PRSS53Q2L4Q9 553 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF645Q8N7E2 425 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR1N2Q8NGR9 330 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR5R1Q8NH85 324 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 C19orf24Q9BVV8 132 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 CEACAM18A8MTB9 384 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 CLDN14O95500 239 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 HOXA5P20719 270 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 FHITP49789 147 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 MIC13Q5XKP0 118 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 MDS2Q8NDY4 140 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 SOSTQ9BQB4 213 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 HEXA-AS1Q9H8Q6 139 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 COA4Q9NYJ1 87 aa10.1□□□□□ -0.79
SYNGAP1-201ENST00000293748 A0A087WWC5 75 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 A0A0J9YW62 118 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 GCSHP23434 173 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 PRDX2P32119 198 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 MAS1LP35410 378 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 CYP2G1PQ6ZSU1 146 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 SAXO1Q8IYX7 474 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR10AG1Q8NH19 301 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 SFRP2Q96HF1 295 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF488Q96MN9 340 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 LOC107984156A0A0G2JMH3 177 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 C8orf88P0DMB2 117 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 CKS2P33552 79 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 ARL17AQ8IVW1 177 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 ST6GALNAC3Q8NDV1 305 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 RAB37Q96AX2 223 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 MESP1Q9BRJ9 268 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 PKIBQ9C010 78 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 PEF1Q9UBV8 284 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 A0A0G2JK05 382 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 LOC389332A0A1B0GUA5 103 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 NPIPB13A6NJU9 1138 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 NPIPB4C9JG80 1138 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 GCSAMQ8N6F7 178 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 G6PC2Q9NQR9 355 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 K7N7A8 449 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 LMX1BO60663 402 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 MGPP08493 103 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 RPL27AP46776 148 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF502Q8TBZ5 544 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 RAB1BQ9H0U4 201 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 RPRMQ9NS64 109 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 HSPB7Q9UBY9 170 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 LHFPL6Q9Y693 200 aa10.09□□□□□ -0.79
SYNGAP1-201ENST00000293748 ALPK2Q86TB3 2170 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 LINC00587B1AMM8 73 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 CTAG1AP78358 180 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 ATRAIDQ6UW56 229 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF841Q6ZN19 808 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 RBPMS2Q6ZRY4 209 aaKnown RBP10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 OR2J1Q9GZK6 312 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF430Q9H8G1 570 aaPredicted RBP10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 PGPA6NDG6 321 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 KLF4O43474 513 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 MDP1Q86V88 176 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 CALHM1Q8IU99 346 aa10.08□□□□□ -0.8
SYNGAP1-201ENST00000293748 DPRXA6NFQ7 191 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms