RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 TIMP3P35625 211 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 CDC34P49427 236 aaPredicted RBP12.44□□□□□ -0.42
CCDC116-201ENST00000292779 ERVK-16P61578 105 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 B2MP61769 119 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 C17orf58Q2M2W7 97 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 ACOT6Q3I5F7 207 aaPredicted RBP12.44□□□□□ -0.42
CCDC116-201ENST00000292779 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 DUX4L9Q6RFH8 374 aaPredicted RBP12.44□□□□□ -0.42
CCDC116-201ENST00000292779 FAM216AQ8WUB2 273 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 HEYLQ9NQ87 328 aaPredicted RBP12.44□□□□□ -0.42
CCDC116-201ENST00000292779 MKRN2OSH3BPM6 223 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 RRHO14718 337 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 OPN1MWP04001 364 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 FABP1P07148 127 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 OPN1MW2P0DN77 364 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 OPN1MW3P0DN78 364 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 CGB3P0DN86 165 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 CGB7P0DN87 165 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 RPL23P62829 140 aaKnown RBP12.44□□□□□ -0.42
CCDC116-201ENST00000292779 RELBQ01201 579 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 FAM27E3Q08E93 113 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 TMEM140Q9NV12 185 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 ACACBO00763 2458 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 TRBV24-1A0A075B6N3 115 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 SMCO3A2RU48 225 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 VDAC2P45880 294 aaPredicted RBP12.43□□□□□ -0.42
CCDC116-201ENST00000292779 BSXQ3C1V8 233 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 C16orf82Q7Z2V1 217 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 ABHD5Q8WTS1 349 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 DDB2Q92466 427 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 FRZBQ92765 325 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 DIRC2Q96SL1 478 aa12.43□□□□□ -0.42
CCDC116-201ENST00000292779 TRAV38-1A0A0B4J264 116 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 TRGC1P0CF51 173 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 RPP30P78346 268 aaKnown RBP12.42□□□□□ -0.42
CCDC116-201ENST00000292779 C3orf36Q3SXR2 165 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 OR52E5Q8NH55 327 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 YLPM1P49750 1951 aaKnown RBP12.42□□□□□ -0.42
CCDC116-201ENST00000292779 LY86O95711 162 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
CCDC116-201ENST00000292779 BMP5P22003 454 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 ABHD12Q8N2K0 398 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 Q8NA96 180 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 FAM222BQ8WU58 562 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 FAM122AQ96E09 287 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 SFXN3Q9BWM7 321 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 GCM1Q9NP62 436 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 GFOD1Q9NXC2 390 aa12.42□□□□□ -0.42
CCDC116-201ENST00000292779 SAA2-SAA4A0A096LPE2 208 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 SEC14L6B5MCN3 397 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 SAA2P0DJI9 122 aaPredicted RBP12.41□□□□□ -0.42
CCDC116-201ENST00000292779 KIR2DS2P43631 304 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 GATA4P43694 442 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 PDLIM3Q53GG5 364 aaPredicted RBP12.41□□□□□ -0.42
CCDC116-201ENST00000292779 TREML4Q6UXN2 200 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 NEIL1Q96FI4 390 aaPredicted RBP12.41□□□□□ -0.42
CCDC116-201ENST00000292779 RNF7Q9UBF6 113 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 KBTBD11-OT1A0A1B0GTJ5 212 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 PRSS46E5RG02 174 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 IGHV1-46P01743 117 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
CCDC116-201ENST00000292779 RAB7AP51149 207 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 TNFAIP6P98066 277 aaPredicted RBP12.41□□□□□ -0.42
CCDC116-201ENST00000292779 C4orf17Q53FE4 359 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 NECAP1Q8NC96 275 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 OR4S2Q8NH73 311 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 GGACTQ9BVM4 153 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 MIOXQ9UGB7 285 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 TCF19Q9Y242 345 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 NBASA2RRP1 2371 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 DYSFO75923 2080 aa12.41□□□□□ -0.42
CCDC116-201ENST00000292779 A8MXE2 369 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 LINC00587B1AMM8 73 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 C11orf94C9JXX5 98 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 PHOX2AO14813 284 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
CCDC116-201ENST00000292779 TMPRSS3P57727 454 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 PRR30Q53SZ7 412 aaPredicted RBP12.4□□□□□ -0.42
CCDC116-201ENST00000292779 FAM57AQ8TBR7 257 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 SDSLQ96GA7 329 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 OR51M1Q9H341 326 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 MS4A5Q9H3V2 200 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 NCOR1P1Q9H4R4 102 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 PATZ1Q9HBE1 687 aaKnown RBP12.4□□□□□ -0.42
CCDC116-201ENST00000292779 GAR1Q9NY12 217 aaKnown RBP12.4□□□□□ -0.42
CCDC116-201ENST00000292779 GAB2Q9UQC2 676 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 PCNX1Q96RV3 2341 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 TRGV10A0A0A0MS01 117 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 TGOLN2O43493 480 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 MPDU1O75352 247 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 SOD3P08294 240 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 NPPCP23582 126 aa12.4□□□□□ -0.42
CCDC116-201ENST00000292779 S100A2P29034 98 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms