RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ZNF2Q9BSG1 426 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-201ENST00000288344 SLC5A7Q9GZV3 580 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF430Q9H8G1 570 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-201ENST00000288344 GNB4Q9HAV0 340 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 TAS2R8Q9NYW2 309 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 EHFQ9NZC4 300 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 SCOCQ9UIL1 159 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 RBM7Q9Y580 266 aaKnown RBP7.09□□□□□ -1.27
HMGN1-201ENST00000288344 A3GALT2U3KPV4 340 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 TRBV9A0A0B4J1U6 114 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 TEX22C9J3V5 150 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 CCL24O00175 119 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 GSTZ1O43708 216 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-201ENST00000288344 CD3DP04234 171 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 FGF2P09038 288 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 VDAC1P21796 283 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 PTBP1P26599 531 aaKnown RBP eCLIP7.08□□□□□ -1.28
HMGN1-201ENST00000288344 SSBP1Q04837 148 aaKnown RBP7.08□□□□□ -1.28
HMGN1-201ENST00000288344 IDO2Q6ZQW0 420 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 VKORC1L1Q8N0U8 176 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM229BQ8NBD8 167 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 OR5H2Q8NGV7 314 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 SMIM4Q8WVI0 70 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 C4orf3Q8WVX3 66 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 ARPC1AQ92747 370 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM68Q96MH6 324 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 TINAGL1Q9GZM7 467 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-201ENST00000288344 PLEKHA2Q9HB19 425 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 IFT46Q9NQC8 304 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 PARP11Q9NR21 331 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 FAM212BQ9NTI7 297 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-201ENST00000288344 FOXA2Q9Y261 457 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-201ENST00000288344 DMRT1Q9Y5R6 373 aa7.08□□□□□ -1.28
HMGN1-201ENST00000288344 TRAV3A0A0B4J244 114 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 MSGN1A6NI15 193 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 FAM25AB3EWG3 89 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 FAM25CB3EWG5 89 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 FAM25GB3EWG6 89 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 M0QYG6 137 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 TNFSF12O43508 249 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 OR2A4O95047 310 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 IGKV1-39P01597 117 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 IGKV1D-39P04432 117 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 F2RP25116 425 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 ETV6P41212 452 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 MRPS10P82664 201 aaKnown RBP7.07□□□□□ -1.28
HMGN1-201ENST00000288344 EGFEM1PQ0D2K5 195 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM267Q0VDI3 215 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-201ENST00000288344 CXorf66Q5JRM2 361 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-201ENST00000288344 PYHIN1Q6K0P9 492 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 SPAG16Q8N0X2 631 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 Q8N1Y9 231 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 TTC9CQ8N5M4 171 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 ADAD2Q8NCV1 583 aaKnown RBP7.07□□□□□ -1.28
HMGN1-201ENST00000288344 OR5M8Q8NGP6 311 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 CASTOR1Q8WTX7 329 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 C15orf40Q8WUR7 153 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 FCAMRQ8WWV6 532 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 OR2A7Q96R45 310 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 BET1LQ9NYM9 111 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 PRELID3BQ9Y3B1 194 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 V9GYH0 126 aa7.07□□□□□ -1.28
HMGN1-201ENST00000288344 A0A1W2PN81 502 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 H3BUA1 57 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 GPR31O00270 319 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 KBTBD11O94819 623 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 HPRT1P00492 218 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 CRYGCP07315 174 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 P0C879 139 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 IGLL1P15814 213 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 TBPP20226 339 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 CHRNA7P36544 502 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 KIR2DS2P43631 304 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 TAS2R31P59538 309 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 FXYD4P59646 89 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 KRTAP10-11P60412 298 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 RND3P61587 244 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 GNB1P62873 340 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 RPL11P62913 178 aaKnown RBP7.06□□□□□ -1.28
HMGN1-201ENST00000288344 DEFA6Q01524 100 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 ZNF45Q02386 682 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 ZNF79Q15937 498 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 DEFB136Q30KP8 78 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 VMA21Q3ZAQ7 101 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 ACTBL2Q562R1 376 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 OR2B11Q5JQS5 317 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 C10orf55Q5SWW7 151 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 OR4A47Q6IF82 309 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 UNQ5815/PRO19632Q6UWF5 114 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 CCDC190Q86UF4 302 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 ARRDC1Q8N5I2 433 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 KLHL30-AS1Q8NEE0 82 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 OR4S2Q8NH73 311 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 TERB2Q8NHR7 220 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 SRSF12Q8WXF0 261 aaKnown RBP7.06□□□□□ -1.28
HMGN1-201ENST00000288344 DGCR14Q96DF8 476 aaKnown RBP7.06□□□□□ -1.28
HMGN1-201ENST00000288344 DIRAS2Q96HU8 199 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 DUX3Q96PT4 197 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 RABL2AQ9UBK7 228 aaPredicted RBP7.06□□□□□ -1.28
HMGN1-201ENST00000288344 RABL2BQ9UNT1 228 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms