RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 AARDQ4LEZ3 155 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 RPL39P5Q59GN2 51 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 ABHD12Q8N2K0 398 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 LRRC29Q8WV35 223 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 SSMEM1Q8WWF3 244 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 BTF3L4Q96K17 158 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 FER1L6-AS2Q96M78 137 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 TTC28Q96AY4 2481 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 NCOR1O75376 2440 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 PRSS46E5RG02 174 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 CXorf1O96002 111 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 COL8A2P25067 703 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 VDAC2P45880 294 aaPredicted RBP10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 THBS3P49746 956 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 TRIP6Q15654 476 aaKnown RBP10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 Q6ZT83 130 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 TRIB1Q96RU8 372 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 ZDHHC11Q9H8X9 412 aa10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 YTHDF2Q9Y5A9 579 aaKnown RBP10.97□□□□□ -0.65
SLC28A1-201ENST00000286749 GPR179Q6PRD1 2367 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 DSPP15924 2871 aaKnown RBP10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 GRIFINA4D1Z8 144 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 SOX15O60248 233 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 GFRA3O60609 400 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 HOXC12P31275 282 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 SOX8P57073 446 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 OCC1Q8TAD7 63 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 CLCF1Q9UBD9 225 aa10.96□□□□□ -0.65
SLC28A1-201ENST00000286749 IGKV3-15P01624 115 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF883P0CG24 379 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 PRDX2P32119 198 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 TIMP3P35625 211 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 RAB4BP61018 213 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 ERVK-16P61578 105 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 MORN2Q502X0 79 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 FAM214BQ7L5A3 538 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 OR10G8Q8NGN5 311 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 MS4A10Q96PG2 267 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 NAGKQ9UJ70 344 aa10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 POLR3KQ9Y2Y1 108 aaPredicted RBP10.96□□□□□ -0.66
SLC28A1-201ENST00000286749 LNP1A1A4G5 178 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 FAM90A9PA6NNJ1 464 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 CECR9P0C854 216 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 RELBQ01201 579 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 TRAT1Q6PIZ9 186 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 CBLN4Q9NTU7 201 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF718Q3SXZ3 478 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 SPATA31B1PQ5VZV4 182 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 C1orf159Q96HA4 380 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 TXNDC17Q9BRA2 123 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 TMEM140Q9NV12 185 aa10.95□□□□□ -0.66
SLC28A1-201ENST00000286749 IL6RP08887 468 aaPredicted RBP10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 CBLN1P23435 193 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF134P52741 427 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 NUTF2P61970 127 aaKnown RBP10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 HLA-DRB5Q30154 266 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 VWA1Q6PCB0 445 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 TMEM178AQ8NBL3 297 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 OR52E5Q8NH55 327 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 ATG101Q9BSB4 218 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 SNHG12Q9BXW3 62 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 DUSP13Q9UII6 198 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 TCF19Q9Y242 345 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 SLC17A3O00476 420 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 TCAPO15273 167 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 GCHFRP30047 84 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 TMPRSS3P57727 454 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 YPEL3P61236 119 aaPredicted RBP10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 FAM90A1Q86YD7 464 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 CMTM2Q8TAZ6 248 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 JPT1Q9UK76 154 aa10.94□□□□□ -0.66
SLC28A1-201ENST00000286749 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 IGHV3OR15-7A0A075B7D8 119 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF705FA8MVS1 300 aaPredicted RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 K7EN84 100 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF705DP0CH99 300 aaPredicted RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF705BP0CI00 300 aaPredicted RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 CD33P20138 364 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 ERVFC1-1P60608 527 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 RPL31P62899 125 aaKnown RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF90Q03938 601 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 EFNB3Q15768 340 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 ARSJQ5FYB0 599 aaPredicted RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 UTF1Q5T230 341 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 C1orf194Q5T5A4 169 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 OR2Z1Q8NG97 314 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 S1PR3Q99500 378 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 IFI27L2Q9H2X8 130 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 LSM4Q9Y4Z0 139 aaKnown RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 KIR2DL5BA0A0G2JN68 375 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 KIR2DL5BA0A0G2JPC4 375 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 FOXH1O75593 365 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 OR10J1P30954 320 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 DHRS13Q6UX07 377 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 C1orf229Q6ZS94 237 aaPredicted RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 KIR2DL5AQ8N109 375 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 STPG3Q8N7X2 389 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 LEAP2Q969E1 77 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms