RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PPP5D1E7EU14 171 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 RBMXL2O75526 392 aaKnown RBP10.72□□□□□ -0.69
C9orf3-201ENST00000277198 HRASP01112 189 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 CD99P14209 185 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 CFHR2P36980 270 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 Q6ZR03 302 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 OR13A1Q8NGR1 328 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 OR4F5Q8NH21 305 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 PPP1R35Q8TAP8 253 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 RNASEH2CQ8TDP1 164 aaKnown RBP10.72□□□□□ -0.69
C9orf3-201ENST00000277198 ACY3Q96HD9 319 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 OR4F4Q96R69 305 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 TRIB1Q96RU8 372 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 MED12LQ86YW9 2145 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 LINC00473A8K010 186 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 TYMSP04818 313 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
C9orf3-201ENST00000277198 CD1BP29016 333 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 KIR2DL2P43627 348 aaPredicted RBP10.71□□□□□ -0.69
C9orf3-201ENST00000277198 GALR1P47211 349 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 CDC34P49427 236 aaPredicted RBP10.71□□□□□ -0.69
C9orf3-201ENST00000277198 SPCS3P61009 180 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 GCNT2Q8N0V5 402 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 OR4X1Q8NH49 305 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 FAM57AQ8TBR7 257 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 RPUSD4Q96CM3 377 aaKnown RBP10.71□□□□□ -0.69
C9orf3-201ENST00000277198 R3HDM4Q96D70 268 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 SSX3Q99909 188 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 PLSCR4Q9NRQ2 329 aa10.71□□□□□ -0.69
C9orf3-201ENST00000277198 ITPR2Q14571 2701 aa10.71□□□□□ -0.7
C9orf3-201ENST00000277198 DCHS2Q6V1P9 2916 aa10.71□□□□□ -0.7
C9orf3-201ENST00000277198 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 TMPRSS2O15393 492 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 YPEL1O60688 119 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 DUTP33316 252 aaKnown RBP10.7□□□□□ -0.7
C9orf3-201ENST00000277198 SSTR5P35346 364 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 LCN2P80188 198 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 FOXF2Q12947 444 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 Q3ZCU0 254 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 GFI1BQ5VTD9 330 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 CXorf67Q86X51 503 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-201ENST00000277198 ZNF383Q8NA42 475 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 SARAFQ96BY9 339 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 YPEL2Q96QA6 119 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 IMMP2LQ96T52 175 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 NCOR1P1Q9H4R4 102 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 PSG11Q9UQ72 335 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 GAB2Q9UQC2 676 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 FBN2P35556 2912 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 IGHV3-64DA0A0J9YX35 117 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 DVL1O14640 695 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 ITGB1BP1O14713 200 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 GGCTO75223 188 aaKnown RBP10.7□□□□□ -0.7
C9orf3-201ENST00000277198 CECR9P0C854 216 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 PRDX2P32119 198 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 KIR2DS2P43631 304 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 GPR12P47775 334 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 TFF3Q07654 80 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 P2RY6Q15077 328 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 PRAMEF6Q5VXH4 476 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 BTNL3Q6UXE8 466 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 Q8N7P7 452 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 OR5R1Q8NH85 324 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 PACRGQ96M98 296 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-201ENST00000277198 HIST1H2BLQ99880 126 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 CHODLQ9H9P2 273 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 KCNIP2Q9NS61 270 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 OR6C3Q9NZP0 311 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 CSMD1Q96PZ7 3565 aa10.7□□□□□ -0.7
C9orf3-201ENST00000277198 C11orf94C9JXX5 98 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 F6UZH7 168 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 PRRG2O14669 202 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 MGST3O14880 152 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 PAGE4O60829 102 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 FABP4P15090 132 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 OPRK1P41145 380 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 PDLIM4P50479 330 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 KCNIP4Q6PIL6 250 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 CNEP1R1Q8N9A8 125 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 SNX22Q96L94 193 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 RAB9BQ9NP90 201 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 TEX15Q9BXT5 2789 aa10.69□□□□□ -0.7
C9orf3-201ENST00000277198 SRRM5B3KS81 715 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 ST8SIA5O15466 376 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 GYPAP02724 150 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 CASP6P55212 293 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 MORN2Q502X0 79 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 CD177Q8N6Q3 437 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 LRRC29Q8WV35 223 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 TMEM170AQ8WVE7 144 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 QTRT1Q9BXR0 403 aaKnown RBP10.68□□□□□ -0.7
C9orf3-201ENST00000277198 UFSP2Q9NUQ7 469 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 IGHV2OR16-5A0A0B4J2B6 119 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 AHRRA9YTQ3 701 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 C19orf84I3L1E1 186 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 F2RL2O00254 374 aa10.68□□□□□ -0.7
C9orf3-201ENST00000277198 HMGB3O15347 200 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms