RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 C19orf35Q6ZS72 473 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 SPAG16Q8N0X2 631 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 GPX8Q8TED1 209 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 ZNF2Q9BSG1 426 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-201ENST00000275036 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-201ENST00000275036 ADAM30Q9UKF2 790 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-201ENST00000275036 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 TRBV9A0A0B4J1U6 114 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 MPPED1O15442 326 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 CREBL2O60519 120 aaPredicted RBP11.05□□□□□ -0.64
HMGN3-201ENST00000275036 HLA-DMAP28067 261 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 RORCP51449 518 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 HERV-K104P61576 105 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 GPR107Q5VW38 600 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 OR4A47Q6IF82 309 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 HAPLN4Q86UW8 402 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 OR5H2Q8NGV7 314 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 OR51H1Q8NH63 302 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 VSTM2AQ8TAG5 236 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 MOB3AQ96BX8 217 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 CMTM3Q96MX0 182 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 SPIN2AQ99865 258 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 SPIN2BQ9BPZ2 258 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 AKIP1Q9NQ31 210 aa11.05□□□□□ -0.64
HMGN3-201ENST00000275036 TRAV3A0A0B4J244 114 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 CGB1A6NKQ9 187 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 RBFOX2O43251 390 aaKnown RBP eCLIP11.04□□□□□ -0.64
HMGN3-201ENST00000275036 HRASP01112 189 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 SPNP16150 400 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 HRH1P35367 487 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 RPL27AP46776 148 aaKnown RBP11.04□□□□□ -0.64
HMGN3-201ENST00000275036 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 TAS2R46P59540 309 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 RHOGP84095 191 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
HMGN3-201ENST00000275036 SNX29P2Q8IUI4 249 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 USMG5Q96IX5 58 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 MRPS26Q9BYN8 205 aaKnown RBP11.04□□□□□ -0.64
HMGN3-201ENST00000275036 BET1LQ9NYM9 111 aa11.04□□□□□ -0.64
HMGN3-201ENST00000275036 PEF1Q9UBV8 284 aaKnown RBP11.04□□□□□ -0.64
HMGN3-201ENST00000275036 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 S1PR2O95136 353 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 HPRT1P00492 218 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 AREGP15514 252 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 ZP3P21754 424 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 MAS1LP35410 378 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
HMGN3-201ENST00000275036 CATR1Q13166 79 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
HMGN3-201ENST00000275036 POU2AF1Q16633 256 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 AADACL3Q5VUY0 350 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 FYTTD1Q96QD9 318 aaKnown RBP11.03□□□□□ -0.64
HMGN3-201ENST00000275036 ASCL2Q99929 193 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
HMGN3-201ENST00000275036 SMIM31A0A1B0GVY4 71 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 PGLYRP1O75594 196 aaPredicted RBP11.02□□□□□ -0.65
HMGN3-201ENST00000275036 OR2J3O76001 311 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 LY86O95711 162 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 RLN1P04808 185 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 ZNF182P17025 639 aaPredicted RBP11.02□□□□□ -0.65
HMGN3-201ENST00000275036 SYNJ2BPP57105 145 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 TAS2R31P59538 309 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 EXOSC2Q13868 293 aaKnown RBP11.02□□□□□ -0.65
HMGN3-201ENST00000275036 IL34Q6ZMJ4 242 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 SCPEP1Q9HB40 452 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 SLC2A9Q9NRM0 540 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 ZNF257Q9Y2Q1 563 aa11.02□□□□□ -0.65
HMGN3-201ENST00000275036 DNAH7Q8WXX0 4024 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 NPIPB5A8MRT5 1133 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 BMPR1BO00238 502 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 UPK2O00526 184 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 RPA2P15927 270 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 NQO2P16083 231 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 HLA-GP17693 338 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 OR2B8PP59922 312 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 ATP5G2Q06055 141 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
HMGN3-201ENST00000275036 GPR141Q7Z602 305 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 OR6Q1Q8NGQ2 317 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 OR6F1Q8NGZ6 308 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 OR4A5Q8NH83 315 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 FANCD2OSQ96PS1 177 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 PLEKHA2Q9HB19 425 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 HRASLSQ9HDD0 168 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 TMEM140Q9NV12 185 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 DMRT1Q9Y5R6 373 aa11.01□□□□□ -0.65
HMGN3-201ENST00000275036 FAM25AB3EWG3 89 aa11□□□□□ -0.65
HMGN3-201ENST00000275036 FAM25CB3EWG5 89 aa11□□□□□ -0.65
HMGN3-201ENST00000275036 FAM25GB3EWG6 89 aa11□□□□□ -0.65
HMGN3-201ENST00000275036 IGLV1-51P01701 117 aa11□□□□□ -0.65
HMGN3-201ENST00000275036 REG1AP05451 166 aa11□□□□□ -0.65
HMGN3-201ENST00000275036 CRYGCP07315 174 aa11□□□□□ -0.65
HMGN3-201ENST00000275036 GP9P14770 177 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms