RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TRAV41A0A0B4J266 112 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 H0Y980 276 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 KBTBD11O94819 623 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 KRASP01116 189 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 IL6RP08887 468 aaPredicted RBP10.01□□□□□ -0.81
SS18-202ENST00000269138 CD40LGP29965 261 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 BTCP35070 178 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 G6PCP35575 357 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 TNXAQ16473 311 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 ECSCRQ19T08 205 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 C19orf54Q5BKX5 351 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 C10orf55Q5SWW7 151 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 LCNL1Q6ZST4 164 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 DMBX1Q8NFW5 382 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 SCGB3A2Q96PL1 93 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 CITED2Q99967 270 aaPredicted RBP10.01□□□□□ -0.81
SS18-202ENST00000269138 WDR12Q9GZL7 423 aaKnown RBP10.01□□□□□ -0.81
SS18-202ENST00000269138 NAA60Q9H7X0 242 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 TMEM140Q9NV12 185 aa10.01□□□□□ -0.81
SS18-202ENST00000269138 ANK2Q01484 3957 aa10□□□□□ -0.81
SS18-202ENST00000269138 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
SS18-202ENST00000269138 NAP1L6A6NFF2 107 aa10□□□□□ -0.81
SS18-202ENST00000269138 CRYM-AS1A6NIL9 109 aa10□□□□□ -0.81
SS18-202ENST00000269138 UPK2O00526 184 aa10□□□□□ -0.81
SS18-202ENST00000269138 SERPINE2P07093 398 aa10□□□□□ -0.81
SS18-202ENST00000269138 OR5AC1P0C628 307 aa10□□□□□ -0.81
SS18-202ENST00000269138 AKR1C4P17516 323 aa10□□□□□ -0.81
SS18-202ENST00000269138 VDAC1P21796 283 aa10□□□□□ -0.81
SS18-202ENST00000269138 CRIP2P52943 208 aaPredicted RBP10□□□□□ -0.81
SS18-202ENST00000269138 MMD2Q8IY49 270 aa10□□□□□ -0.81
SS18-202ENST00000269138 LFNGQ8NES3 379 aa10□□□□□ -0.81
SS18-202ENST00000269138 SGMS2Q8NHU3 365 aa10□□□□□ -0.81
SS18-202ENST00000269138 VSTM2AQ8TAG5 236 aa10□□□□□ -0.81
SS18-202ENST00000269138 FAM212BQ9NTI7 297 aaPredicted RBP10□□□□□ -0.81
SS18-202ENST00000269138 BET1LQ9NYM9 111 aa10□□□□□ -0.81
SS18-202ENST00000269138 ZNF580Q9UK33 172 aa10□□□□□ -0.81
SS18-202ENST00000269138 TNCP24821 2201 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 MSGN1A6NI15 193 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 MARCH11A6NNE9 402 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 E7EUB6 86 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 SOX15O60248 233 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 OR9G9P0C7N8 305 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 APELAP0DMC3 54 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 PPIFP30405 207 aaKnown RBP9.99□□□□□ -0.81
SS18-202ENST00000269138 ERVK-16P61578 105 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 SLC35B1P78383 322 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 CD83Q01151 205 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 IFITM3Q01628 133 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 ASPHD1Q5U4P2 390 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 UNQ5815/PRO19632Q6UWF5 114 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 TMED4Q7Z7H5 227 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 MINDY2Q8NBR6 621 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 GLYATL2Q8WU03 294 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 SEC22AQ96IW7 307 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 SLC25A21Q9BQT8 299 aaPredicted RBP9.99□□□□□ -0.81
SS18-202ENST00000269138 C7orf50Q9BRJ6 194 aaKnown RBP9.99□□□□□ -0.81
SS18-202ENST00000269138 AIFM2Q9BRQ8 373 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 PRR13Q9NZ81 148 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 FLVCR2Q9UPI3 526 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 NSG2Q9Y328 171 aa9.99□□□□□ -0.81
SS18-202ENST00000269138 A0A1B0GW64 132 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 A0A1W2PRX2 142 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 TCRBV4S1A1TA0A5B7 111 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 CENPXA8MT69 81 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 LYRM1O43325 122 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 IGKV1-5P01602 117 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 IGHG4P01861 327 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 OPN1MWP04001 364 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 OPN1MW2P0DN77 364 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 OPN1MW3P0DN78 364 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 UCP1P25874 307 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 RPL8P62917 257 aaKnown RBP9.98□□□□□ -0.81
SS18-202ENST00000269138 SUPT4H1P63272 117 aaKnown RBP9.98□□□□□ -0.81
SS18-202ENST00000269138 IZUMO4Q1ZYL8 232 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 TRIM16LQ309B1 348 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 NSUN5P1Q3KNT7 163 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 OR5T1Q8NG75 326 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 OR4A5Q8NH83 315 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 LHFPL5Q8TAF8 219 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 CASTOR1Q8WTX7 329 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 SRSF12Q8WXF0 261 aaKnown RBP9.98□□□□□ -0.81
SS18-202ENST00000269138 GON7Q9BXV9 100 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 TMEM222Q9H0R3 208 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 KLK15Q9H2R5 256 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 TBC1D24Q9ULP9 559 aa9.98□□□□□ -0.81
SS18-202ENST00000269138 A0A1W2PN81 502 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 HMX3A6NHT5 357 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 UPK1BO75841 260 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 ACTL6BO94805 426 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 NDUFB6O95139 128 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 RPLP1P05386 114 aaKnown RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 HLA-GP17693 338 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 CHRNA7P36544 502 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 TMEM267Q0VDI3 215 aaPredicted RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 RBMS2Q15434 407 aaKnown RBP9.97□□□□□ -0.81
SS18-202ENST00000269138 AKIRIN2Q53H80 203 aa9.97□□□□□ -0.81
SS18-202ENST00000269138 TEX38Q6PEX7 206 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms